RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 STHQ8IWL8 128 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 NKX6-2Q9C056 277 aaPredicted RBP11.26□□□□□ -0.61
SNIP1-202ENST00000468040 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 PGPA6NDG6 321 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 M0R3E3 92 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 CMTM2Q8TAZ6 248 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 MRAPQ8TCY5 172 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 CITED4Q96RK1 184 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
SNIP1-202ENST00000468040 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
SNIP1-202ENST00000468040 A0A0J9YX75 114 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
SNIP1-202ENST00000468040 F6UB75 175 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 H3BMM0 161 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
SNIP1-202ENST00000468040 UBE2G2P60604 165 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 DEFB121Q5J5C9 76 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
SNIP1-202ENST00000468040 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 IFNA1P01562 189 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 DEFB1P60022 68 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
SNIP1-202ENST00000468040 CCL20P78556 96 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
SNIP1-202ENST00000468040 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
SNIP1-202ENST00000468040 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
SNIP1-202ENST00000468040 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 PRAC2D3DTV9 90 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 PAGE4O60829 102 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 CNN1P51911 297 aaKnown RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 APOC4P55056 127 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
SNIP1-202ENST00000468040 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 LYPD6BQ8NI32 183 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
SNIP1-202ENST00000468040 KIR2DL5BA0A0G2JN68 375 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 KIR2DL5BA0A0G2JPC4 375 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 DIRC3C9JPN6 131 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
SNIP1-202ENST00000468040 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
SNIP1-202ENST00000468040 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
SNIP1-202ENST00000468040 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
SNIP1-202ENST00000468040 LINC00322Q6ZN03 302 aaPredicted RBP11.21□□□□□ -0.61
SNIP1-202ENST00000468040 KIR2DL5AQ8N109 375 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
SNIP1-202ENST00000468040 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 A8MTW9 85 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 K7EQM0 130 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
SNIP1-202ENST00000468040 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
SNIP1-202ENST00000468040 RAB14P61106 215 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 ATG101Q9BSB4 218 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
SNIP1-202ENST00000468040 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
SNIP1-202ENST00000468040 F6UZH7 168 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
SNIP1-202ENST00000468040 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 TCRAP04437 139 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 NMBP08949 121 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 ATP5G3P48201 142 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 CCDC28AQ8IWP9 274 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 HIST1H2BAQ96A08 127 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
SNIP1-202ENST00000468040 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-202ENST00000468040 BCL2P10415 239 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 GNG5P63218 68 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 IFITM2Q01629 132 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 VAX2Q9UIW0 290 aa11.18□□□□□ -0.62
SNIP1-202ENST00000468040 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
SNIP1-202ENST00000468040 PEX7O00628 323 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms