RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TRAV2A0A0B4J234 112 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 LYRM9A8MSI8 78 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 M0R129 80 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 M0R1X1 148 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 NDUFA4O00483 81 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 PTTG1O95997 202 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 TSHBP01222 138 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 CTSDP07339 412 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-207ENST00000467273 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 ESDP10768 282 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 CD37P11049 281 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 DAPP51397 102 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 RRAS2P62070 204 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-207ENST00000467273 IFITM2Q01629 132 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 CDK10Q15131 360 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 SFXN4Q6P4A7 337 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 FAM231DQ6ZW35 169 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 OR1L8Q8NGR8 309 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 TRUB1Q8WWH5 349 aaKnown RBP3.83□□□□□ -1.8
PTCD3-207ENST00000467273 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 ZNF184Q99676 751 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-207ENST00000467273 THTPAQ9BU02 230 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 SELENOIQ9C0D9 397 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 RBKSQ9H477 322 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 FNDC4Q9H6D8 234 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-207ENST00000467273 THYN1Q9P016 225 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 CKLFQ9UBR5 152 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 NACAE9PAV3 2078 aa3.83□□□□□ -1.8
PTCD3-207ENST00000467273 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
PTCD3-207ENST00000467273 IGLV11-55A0A075B6I3 123 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 NBDYA0A0U1RRE5 68 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 MAP1LC3B2A6NCE7 125 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 K7ERU9 68 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 BUB3O43684 328 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 OR5AL1P0C617 328 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 GALR1P47211 349 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 RORCP51449 518 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 TAS2R43P59537 309 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 SELENOTP62341 195 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 RPL8P62917 257 aaKnown RBP3.82□□□□□ -1.8
PTCD3-207ENST00000467273 RPL18AQ02543 176 aaKnown RBP3.82□□□□□ -1.8
PTCD3-207ENST00000467273 RIGQ13278 110 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 KDM4DQ6B0I6 523 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 GLIPR1L1Q6UWM5 242 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 GSG1LQ6UXU4 331 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 CEACAM19Q7Z692 300 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 C15orf53Q8NAA6 179 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 UBAC2Q8NBM4 344 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 VSTM2AQ8TAG5 236 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 VN1R17PQ8TDU5 208 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 CANT1Q8WVQ1 401 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 MAP1LC3BQ9GZQ8 125 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 TMEM14BQ9NUH8 114 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 COMMD9Q9P000 198 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 CARHSP1Q9Y2V2 147 aaKnown RBP3.82□□□□□ -1.8
PTCD3-207ENST00000467273 AGRNO00468 2067 aa3.82□□□□□ -1.8
PTCD3-207ENST00000467273 A0A1B0GW64 132 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 A0A1W2PRE2 83 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 IGHV3-23P01764 117 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-207ENST00000467273 UBBP0CG47 229 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 SPART-AS1P0CW21 52 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 SAA1P0DJI8 122 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-207ENST00000467273 DEFA4P12838 97 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 RAB5AP20339 215 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 S100A11P31949 105 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 GPR183P32249 361 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 RPL27AP46776 148 aaKnown RBP3.81□□□□□ -1.8
PTCD3-207ENST00000467273 HLA-DRB3P79483 266 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 ARFRP1Q13795 201 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 OR10K2Q6IF99 312 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 RPL22L1Q6P5R6 122 aaKnown RBP3.81□□□□□ -1.8
PTCD3-207ENST00000467273 CBLN2Q8IUK8 224 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 CSNK1G2-AS1Q8NCQ2 148 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 MCFD2Q8NI22 146 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 C20orf144Q9BQM9 153 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 FAAP24Q9BTP7 215 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 SLC25A39Q9BZJ4 359 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-207ENST00000467273 BANF2Q9H503 90 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 VSIRQ9H7M9 311 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 OR51B2Q9Y5P1 312 aa3.81□□□□□ -1.8
PTCD3-207ENST00000467273 HMGB3O15347 200 aaKnown RBP3.8□□□□□ -1.8
PTCD3-207ENST00000467273 FKBP6O75344 327 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 C1QBP02746 253 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 PIGPP57054 158 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 RAB5BP61020 215 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 SMAGPQ0VAQ4 97 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 PMVKQ15126 192 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 ACOT6Q3I5F7 207 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-207ENST00000467273 TTC32Q5I0X7 151 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 C10orf55Q5SWW7 151 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 C6orf201Q7Z4U5 140 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms