RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DEFB114Q30KQ6 69 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 GOLT1AQ6ZVE7 132 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 MRPL53Q96EL3 112 aaKnown RBP9.77□□□□□ -0.85
COL4A1-202ENST00000467182 MS4A6AQ9H2W1 248 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 RPH3ALQ9UNE2 315 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 PRELID1Q9Y255 219 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 TENM1Q9UKZ4 2725 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 IGKV3-7A0A075B6H7 116 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TRAV34A0A0B4J273 112 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TRBV6-1A0A0K0K1D8 114 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 PGPEP1LA6NFU8 196 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 K7EQG2 157 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TAS2R60P59551 318 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
COL4A1-202ENST00000467182 PSG3Q16557 428 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TMEM183BQ1AE95 376 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TMEM241Q24JQ0 296 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 LCN12Q6JVE5 192 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 SVBPQ8N300 66 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 GBGT1Q8N5D6 347 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TVP23CQ96ET8 276 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 C16orf92Q96LL3 132 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 NIPSNAP3BQ9BS92 247 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 ZNF747Q9BV97 191 aa9.76□□□□□ -0.85
COL4A1-202ENST00000467182 TRAV8-1A0A0A6YYK1 113 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 CNN1P51911 297 aaKnown RBP9.75□□□□□ -0.85
COL4A1-202ENST00000467182 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
COL4A1-202ENST00000467182 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 TMEM61Q8N0U2 210 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 SPATA3Q8NHX4 192 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 FMC1Q96HJ9 113 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 SGK494Q96LW2 274 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 CLEC5AQ9NY25 188 aa9.75□□□□□ -0.85
COL4A1-202ENST00000467182 FBN1P35555 2871 aaKnown RBP9.75□□□□□ -0.85
COL4A1-202ENST00000467182 IGKV2-40A0A087WW87 121 aaPredicted RBP9.74□□□□□ -0.85
COL4A1-202ENST00000467182 TRAV2A0A0B4J234 112 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 SERTM2A0A1B0GWG4 89 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 K7EN84 100 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 TSPAN4O14817 238 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 IGKV2D-40P01614 121 aaPredicted RBP9.74□□□□□ -0.85
COL4A1-202ENST00000467182 S100A9P06702 114 aaKnown RBP9.74□□□□□ -0.85
COL4A1-202ENST00000467182 CD300EQ496F6 205 aaPredicted RBP9.74□□□□□ -0.85
COL4A1-202ENST00000467182 Q86TA4 180 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 LINC01551Q86U37 167 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 OCC1Q8TAD7 63 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
COL4A1-202ENST00000467182 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 IZUMO1RA6ND01 250 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 SNAPINO95295 136 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 LTAP01374 205 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 CSN1S1P47710 185 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 DEFB1P60022 68 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 PNRC1Q12796 327 aaPredicted RBP9.73□□□□□ -0.85
COL4A1-202ENST00000467182 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 WFDC3Q8IUB2 231 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 DYNLRB2Q8TF09 96 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 VGLL1Q99990 258 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
COL4A1-202ENST00000467182 TRAV25A0A0B4J276 109 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 SCO1O75880 301 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 PF4P02776 101 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 TFPI2P48307 235 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 GNG4P50150 75 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 UBE2G1P62253 170 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 FLI1Q01543 452 aaPredicted RBP9.72□□□□□ -0.85
COL4A1-202ENST00000467182 ERCC8Q13216 396 aa9.72□□□□□ -0.85
COL4A1-202ENST00000467182 AURKAIP1Q9NWT8 199 aaPredicted RBP9.72□□□□□ -0.85
COL4A1-202ENST00000467182 C7orf77A4D0Y5 90 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 M0R036 132 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 DNASE2O00115 360 aaPredicted RBP9.71□□□□□ -0.86
COL4A1-202ENST00000467182 SAP30O75446 220 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 GCGP01275 180 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ID1P41134 155 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ADIRFQ15847 76 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 RBPMS2Q6ZRY4 209 aaKnown RBP9.71□□□□□ -0.86
COL4A1-202ENST00000467182 PRNTQ86SH4 94 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 BAGE2Q86Y30 109 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 NHLRC2Q8NBF2 726 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF738Q8NE65 137 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 TMEM158Q8WZ71 300 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ISOC2Q96AB3 205 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ASCL2Q99929 193 aa9.71□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
COL4A1-202ENST00000467182 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 K7EQM0 130 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 RHEBQ15382 184 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 C9orf47Q6ZRZ4 202 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
COL4A1-202ENST00000467182 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms