RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 A8MTW9 85 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 PRB2P02812 416 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-205ENST00000466897 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 ICAM4Q14773 271 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-205ENST00000466897 IQCF2Q8IXL9 164 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
NPHP4-205ENST00000466897 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
NPHP4-205ENST00000466897 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 H3BMM0 161 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 ZNF124Q15973 351 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
NPHP4-205ENST00000466897 STHQ8IWL8 128 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 TUBA4BQ9H853 241 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 MEGF8Q7Z7M0 2845 aa11.22□□□□□ -0.61
NPHP4-205ENST00000466897 PGPA6NDG6 321 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 GGTLC3B5MD39 225 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 M0R3E3 92 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.61
NPHP4-205ENST00000466897 CSN1S1P47710 185 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 DEFA6Q01524 100 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 ACTL10Q5JWF8 245 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.61
NPHP4-205ENST00000466897 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-205ENST00000466897 KIR2DL5BA0A0G2JN68 375 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 KIR2DL5BA0A0G2JPC4 375 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
NPHP4-205ENST00000466897 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
NPHP4-205ENST00000466897 GDF5OSQ5U4N7 250 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 ZNF767PQ75MW2 155 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 KIR2DL5AQ8N109 375 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 MRAPQ8TCY5 172 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
NPHP4-205ENST00000466897 YTHDF2Q9Y5A9 579 aaKnown RBP11.2□□□□□ -0.62
NPHP4-205ENST00000466897 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
NPHP4-205ENST00000466897 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
NPHP4-205ENST00000466897 F6UB75 175 aa11.19□□□□□ -0.62
NPHP4-205ENST00000466897 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
NPHP4-205ENST00000466897 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
NPHP4-205ENST00000466897 CCL20P78556 96 aa11.19□□□□□ -0.62
NPHP4-205ENST00000466897 CCDC28AQ8IWP9 274 aa11.19□□□□□ -0.62
NPHP4-205ENST00000466897 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
NPHP4-205ENST00000466897 A0A1B0GV50 99 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 NPIPB6E9PJ23 425 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 PAGE4O60829 102 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 IFNA1P01562 189 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 FRMD6-AS1P0C7T7 363 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
NPHP4-205ENST00000466897 APOC4P55056 127 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 DEFB1P60022 68 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 UBE2G2P60604 165 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 SUMO1P63165 101 aaKnown RBP11.18□□□□□ -0.62
NPHP4-205ENST00000466897 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
NPHP4-205ENST00000466897 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
NPHP4-205ENST00000466897 TCRAP04437 139 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 NMBP08949 121 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
NPHP4-205ENST00000466897 IFITM2Q01629 132 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 HIST1H1AQ02539 215 aaPredicted RBP11.17□□□□□ -0.62
NPHP4-205ENST00000466897 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 GNG13Q9P2W3 67 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
NPHP4-205ENST00000466897 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
NPHP4-205ENST00000466897 UBE2CO00762 179 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 BCL2P10415 239 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
NPHP4-205ENST00000466897 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-205ENST00000466897 K7EQM0 130 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-205ENST00000466897 AMBPP02760 352 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 ATP5G3P48201 142 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 OR4B1Q8NGF8 309 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
NPHP4-205ENST00000466897 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 F6UZH7 168 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 PEX7O00628 323 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms