RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TSKUQ8WUA8 353 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 NUDT11Q96G61 164 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 F2Z2F3 143 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 SLC25A5P05141 298 aaKnown RBP14.41□□□□□ -0.1
CAPN3-209ENST00000466222 SRIP30626 198 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 SCGB2A2Q13296 93 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 HIST2H2BDQ6DRA6 164 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 OR1B1Q8NGR6 318 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 VAMP8Q9BV40 100 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 THYN1Q9P016 225 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 IGLV1-40P01703 118 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 TRGV3P03979 118 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 PF4V1P10720 104 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 RAB4AP20338 218 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 NUTF2P61970 127 aaKnown RBP14.4□□□□□ -0.1
CAPN3-209ENST00000466222 CT83Q5H943 113 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 C5orf17Q8NAS9 161 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 OR4B1Q8NGF8 309 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 FMC1Q96HJ9 113 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 LINC00479Q96M42 142 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 MIEN1Q9BRT3 115 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 C21orf62Q9NYP8 219 aa14.4□□□□□ -0.1
CAPN3-209ENST00000466222 A0A1W2PS18 150 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 OR2T8A6NH00 312 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 EREGO14944 169 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 CRLF1O75462 422 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF324O75467 553 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-209ENST00000466222 NBEAP1P0C6P0 100 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 IGLC1P0CG04 106 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 ORM2P19652 201 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 AMTP48728 403 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 SLC35B1P78383 322 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 KLK9Q2XQG4 91 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 Q8N2B8 174 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 NHLRC2Q8NBF2 726 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 GPR82Q96P67 336 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 ATG101Q9BSB4 218 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 KLK9Q9UKQ9 250 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 IGKV1-17P01599 117 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 RNASE1P07998 156 aaKnown RBP14.39□□□□□ -0.11
CAPN3-209ENST00000466222 KLF5Q13887 457 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-209ENST00000466222 SNHG12Q9BXW3 62 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 NRN1Q9NPD7 142 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF492Q9P255 531 aa14.39□□□□□ -0.11
CAPN3-209ENST00000466222 TEP1Q99973 2627 aaKnown RBP14.38□□□□□ -0.11
CAPN3-209ENST00000466222 PGPA6NDG6 321 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 TOMM40O96008 361 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 IGHV3-11P01762 117 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 GP9P14770 177 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 KIAA1644Q3SXP7 199 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 Q56UQ5 140 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 NUP35Q8NFH5 326 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 CCDC140Q96MF4 163 aa14.38□□□□□ -0.11
CAPN3-209ENST00000466222 TRAV34A0A0B4J273 112 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 IGHV3-35A0A0C4DH35 117 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 RAB9AP51151 201 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 MFAP4P55083 255 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 VN1R17PQ8TDU5 208 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 TMEM14CQ9P0S9 112 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-209ENST00000466222 IGHG4P01861 327 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 CLEC3BP05452 202 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 GPR183P32249 361 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 FAM162BQ5T6X4 162 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 CLEC19AQ6UXS0 136 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF502Q8TBZ5 544 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 MLST8Q9BVC4 326 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 HIGD1AQ9Y241 93 aa14.37□□□□□ -0.11
CAPN3-209ENST00000466222 DIRC3C9JPN6 131 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 GNG7O60262 68 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 CTSGP08311 255 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 PSMB8P28062 276 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 ATP5G2Q06055 141 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 C18orf32Q8TCD1 76 aa14.36□□□□□ -0.11
CAPN3-209ENST00000466222 LTAP01374 205 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 TRBV12-3P01733 135 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 PSG1P11464 419 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 KRTDAPP60985 99 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 GNG5P63218 68 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 SLAQ13239 276 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 BLNKQ8WV28 456 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 RCHY1Q96PM5 261 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 GFRA4Q9GZZ7 299 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 RPP21Q9H633 154 aaKnown RBP14.35□□□□□ -0.11
CAPN3-209ENST00000466222 A0A1B0GXF2 115 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 RPLP1P05386 114 aaKnown RBP14.35□□□□□ -0.11
CAPN3-209ENST00000466222 CD33P20138 364 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 PMCHP20382 165 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF705AQ6ZN79 300 aaPredicted RBP14.35□□□□□ -0.11
CAPN3-209ENST00000466222 Q8N976 141 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 NEU1Q99519 415 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 OTORQ9NRC9 128 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF580Q9UK33 172 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
CAPN3-209ENST00000466222 TRBV6-1A0A0K0K1D8 114 aa14.34□□□□□ -0.11
CAPN3-209ENST00000466222 FAM231BA6NCW3 169 aa14.34□□□□□ -0.11
CAPN3-209ENST00000466222 A8MWL6 223 aa14.34□□□□□ -0.11
CAPN3-209ENST00000466222 TCRAP04437 139 aa14.34□□□□□ -0.11
CAPN3-209ENST00000466222 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
CAPN3-209ENST00000466222 ZNF414Q96IQ9 312 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms