RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 XCL2Q9UBD3 114 aa2.42□□□□□ -2.02
SNX4-202ENST00000465505 LY75O60449 1722 aa2.42□□□□□ -2.02
SNX4-202ENST00000465505 NEXMIFQ5QGS0 1516 aa2.42□□□□□ -2.02
SNX4-202ENST00000465505 NCOA6Q14686 2063 aaPredicted RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 GBF1Q92538 1859 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 FAM208AQ9UK61 1670 aaKnown RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 ADGRB2O60241 1585 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 HEATR1Q9H583 2144 aaKnown RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 NOTCH2Q04721 2471 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 TRAV14DV4A0A0A6YYC5 116 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 KLF18A0A0U1RQI7 1052 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 A0A1W2PNU3 283 aaPredicted RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 GRIFINA4D1Z8 144 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 DPRXA6NFQ7 191 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 FAM24AA6NFZ4 105 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 A8MWL6 223 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 SNURFLB1AK76 121 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 IGLL5B9A064 214 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 H3BP45 60 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 H3BUT2 72 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 UBE2L6O14933 153 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 ZNF73O43830 326 aaPredicted RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 CST7O76096 145 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 TCL1BO95988 128 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 TRBV12-3P01733 135 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 IGHV3-7P01780 117 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 FRMD6-AS1P0C7T7 363 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 COX6A1P12074 109 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 CD70P32970 193 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 INPP1P49441 399 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 PSMB2P49721 201 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 CCL23P55773 120 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 NPC2P61916 151 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 CACNG7P62955 275 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 LGALS9CQ6DKI2 356 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 RFLNAQ6ZTI6 216 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 C6orf223Q8N319 242 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 TMEM75Q8N9X5 138 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 PRSS33Q8NF86 280 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 OR10G2Q8NGC3 310 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 RBMXL1Q96E39 390 aaKnown RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 CCL13Q99616 98 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 CHAC1Q9BUX1 264 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 DPH3P1Q9H4G8 78 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 ZNF286AQ9HBT8 521 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 SLC39A9Q9NUM3 307 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 C19orf25Q9UFG5 118 aaPredicted RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 HHLA3Q9XRX5 114 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 ZNF835Q9Y2P0 537 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 KLK5Q9Y337 293 aaPredicted RBP2.41□□□□□ -2.02
SNX4-202ENST00000465505 HES2Q9Y543 173 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 MPDZO75970 2070 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 SLIT1O75093 1534 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 COL18A1P39060 1754 aa2.41□□□□□ -2.02
SNX4-202ENST00000465505 SAMD9LQ8IVG5 1584 aa2.4□□□□□ -2.02
SNX4-202ENST00000465505 NUP98P52948 1817 aa2.4□□□□□ -2.02
SNX4-202ENST00000465505 COL1A1P02452 1464 aaPredicted RBP2.4□□□□□ -2.02
SNX4-202ENST00000465505 COL16A1Q07092 1604 aaPredicted RBP2.4□□□□□ -2.03
SNX4-202ENST00000465505 TRAV9-1A0A075B6T8 112 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 A0A087WW49 117 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 FXYD6-FXYD2A0A087WZ82 144 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 A0A0D9SEW6 157 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 A0A0J9YXV3 536 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 K7EM74 188 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 M0R381 172 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 IGLV3-27P01718 113 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 IGHV3-9P01782 118 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 IGKCP01834 107 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 LGALS3P17931 250 aaKnown RBP2.4□□□□□ -2.03
SNX4-202ENST00000465505 NDUFA8P51970 172 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 CRYBA2P53672 197 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 MP68P56378 58 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 ATP5EP56381 51 aaPredicted RBP2.4□□□□□ -2.03
SNX4-202ENST00000465505 LINC00313P59037 77 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 MPV17LQ2QL34 196 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 CFAP126Q5VTH2 177 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 FAM219BQ5XKK7 198 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 TIFABQ6ZNK6 161 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 FAM19A3Q7Z5A8 133 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
SNX4-202ENST00000465505 OR5AS1Q8N127 324 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 ZNF843Q8N446 348 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 MORN4Q8NDC4 146 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 WFDC11Q8NEX6 87 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 FXYD6Q9H0Q3 95 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 GABARAPL1Q9H0R8 117 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 SPRR3Q9UBC9 169 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 CKLFQ9UBR5 152 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 LSM2Q9Y333 95 aaKnown RBP2.4□□□□□ -2.03
SNX4-202ENST00000465505 MOB4Q9Y3A3 225 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 GREB1Q4ZG55 1949 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 SIP14410 1827 aa2.4□□□□□ -2.03
SNX4-202ENST00000465505 MGAMO43451 1857 aa2.39□□□□□ -2.03
SNX4-202ENST00000465505 PLXNB3Q9ULL4 1909 aa2.39□□□□□ -2.03
SNX4-202ENST00000465505 IGHV6-1A0A0B4J1U7 121 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms