RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 HINT1P49773 126 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-204ENST00000465425 PRSS3P2Q8NHM4 247 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 LYZL1Q6UWQ5 148 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 FA2HQ7L5A8 372 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 ST20Q9HBF5 79 aa14.3□□□□□ -0.12
SYNE4-204ENST00000465425 ATRXP46100 2492 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 NDUFS7O75251 213 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 EGR2P11161 476 aaPredicted RBP14.29□□□□□ -0.12
SYNE4-204ENST00000465425 Q8N9W7 124 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 SIRPDQ9H106 197 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 IGHV3-35A0A0C4DH35 117 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
SYNE4-204ENST00000465425 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 ZNF493Q6ZR52 646 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 ARL6IP6Q8N6S5 226 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 PRR25Q96S07 402 aa14.29□□□□□ -0.12
SYNE4-204ENST00000465425 IGHV3OR16-8A0A075B7F1 116 aa14.28□□□□□ -0.12
SYNE4-204ENST00000465425 NPSP0C0P6 89 aa14.28□□□□□ -0.12
SYNE4-204ENST00000465425 ECSCRQ19T08 205 aa14.28□□□□□ -0.12
SYNE4-204ENST00000465425 WNK2Q9Y3S1 2297 aa14.28□□□□□ -0.12
SYNE4-204ENST00000465425 C15orf32Q32M92 178 aa14.27□□□□□ -0.12
SYNE4-204ENST00000465425 UNQ5815/PRO19632Q6UWF5 114 aa14.27□□□□□ -0.12
SYNE4-204ENST00000465425 A0A1W2PPR1 153 aa14.27□□□□□ -0.13
SYNE4-204ENST00000465425 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
SYNE4-204ENST00000465425 GPR183P32249 361 aa14.27□□□□□ -0.13
SYNE4-204ENST00000465425 UBTD1Q9HAC8 227 aa14.27□□□□□ -0.13
SYNE4-204ENST00000465425 IGHV2-70DA0A0C4DH43 119 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 BMI1P35226 326 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 UBE2E1P51965 193 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 OR10AG1Q8NH19 301 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 Q8TAT8 98 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 TMEM213A2RRL7 107 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 IGFL4Q6B9Z1 124 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 COX8CQ7Z4L0 72 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 FAM110DQ8TAY7 271 aaPredicted RBP14.26□□□□□ -0.13
SYNE4-204ENST00000465425 SMAD5-AS1Q9Y6J3 95 aa14.26□□□□□ -0.13
SYNE4-204ENST00000465425 D6R8Y8 96 aa14.25□□□□□ -0.13
SYNE4-204ENST00000465425 COL6A6A6NMZ7 2263 aa14.25□□□□□ -0.13
SYNE4-204ENST00000465425 VGLL1Q99990 258 aa14.25□□□□□ -0.13
SYNE4-204ENST00000465425 MCRIP2Q9BUT9 160 aaKnown RBP14.25□□□□□ -0.13
SYNE4-204ENST00000465425 SVEP1Q4LDE5 3571 aa14.25□□□□□ -0.13
SYNE4-204ENST00000465425 ASH1LQ9NR48 2969 aaKnown RBP14.24□□□□□ -0.13
SYNE4-204ENST00000465425 SAA4P35542 130 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
SYNE4-204ENST00000465425 FAM104BQ5XKR9 115 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 AMN1Q8IY45 258 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 ORMDL3Q8N138 153 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 LOC389332A0A1B0GUA5 103 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 ATP6V0E1O15342 81 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 CLEC3BP05452 202 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 IFI27P40305 119 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-204ENST00000465425 RAB9AP51151 201 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 EFNA4P52798 201 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 RHOGP84095 191 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 MUC21Q5SSG8 566 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 ZNF502Q8TBZ5 544 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 PRELID3AQ96N28 172 aa14.24□□□□□ -0.13
SYNE4-204ENST00000465425 HLA-DMBP28068 263 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 SLC25A34Q6PIV7 304 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 FER1L6-AS1Q8NA97 138 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 SPTBN1Q01082 2364 aaKnown RBP14.23□□□□□ -0.13
SYNE4-204ENST00000465425 GOSR1O95249 250 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 TWIST1Q15672 202 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 ZNF747Q9BV97 191 aa14.23□□□□□ -0.13
SYNE4-204ENST00000465425 LINC01545Q5VT33 79 aa14.22□□□□□ -0.13
SYNE4-204ENST00000465425 PMCHL2Q9BQD1 86 aa14.22□□□□□ -0.13
SYNE4-204ENST00000465425 MED13LQ71F56 2210 aa14.22□□□□□ -0.13
SYNE4-204ENST00000465425 IGHG4P01861 327 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 ZNF80P51504 273 aaPredicted RBP14.21□□□□□ -0.13
SYNE4-204ENST00000465425 BPESC1Q9GZL8 116 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 SIGLEC8Q9NYZ4 499 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 ORM1P02763 201 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 TP73-AS1Q9UF72 201 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 U3KQK5 164 aa14.21□□□□□ -0.13
SYNE4-204ENST00000465425 MRPL51Q4U2R6 128 aaKnown RBP14.2□□□□□ -0.14
SYNE4-204ENST00000465425 MS4A6AQ9H2W1 248 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 BUB3O43684 328 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 CLEC19AQ6UXS0 136 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 ORAOV1Q8WV07 137 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 AJUBAQ96IF1 538 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
SYNE4-204ENST00000465425 FABP5P3A8MUU1 101 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 CKS2P33552 79 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 FAM106AQ4KMX7 169 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 SCRT2Q9NQ03 307 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 G3V318 75 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 LY6DQ14210 128 aa14.19□□□□□ -0.14
SYNE4-204ENST00000465425 A0A087X0K7 114 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 IGHV3-66A0A0C4DH42 116 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 ERCC8Q13216 396 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 ZNF738Q8NE65 137 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 OR8A1Q8NGG7 326 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 EEF1AKMT3Q96AZ1 226 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 SLC50A1Q9BRV3 221 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 NPFFO15130 113 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 IGLC6P0CF74 106 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 LMO4P61968 165 aa14.18□□□□□ -0.14
SYNE4-204ENST00000465425 LOXL1Q08397 574 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms