RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 A0A0J9YX75 114 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 IFITM5A6NNB3 132 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 CRYGAP11844 174 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 HIST1H1DP16402 221 aaKnown RBP2.4□□□□□ -2.03
PTCD3-205ENST00000464541 GNG2P59768 71 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 TMEM258P61165 79 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 FOXF1Q12946 379 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 ESRGQ1W209 222 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 ZNF181Q2M3W8 571 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 MEIG1Q5JSS6 88 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 GTF2H5Q6ZYL4 71 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 CIB3Q96Q77 187 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-205ENST00000464541 SNRNP25Q9BV90 132 aaKnown RBP2.4□□□□□ -2.03
PTCD3-205ENST00000464541 C14orf132Q9NPU4 83 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 ZFP30Q9Y2G7 519 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 HSPE1-MOB4S4R3N1 261 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 DLC1Q96QB1 1528 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 MAST2Q6P0Q8 1798 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 KIAA1107Q9UPP5 1409 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 CACNA1DQ01668 2161 aa2.4□□□□□ -2.03
PTCD3-205ENST00000464541 NALCNQ8IZF0 1738 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 TRBV20-1A0A075B6N2 111 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 IFNA17P01571 189 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 PMP2P02689 132 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 ETV6P41212 452 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 PCBD1P61457 104 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 SNRPD3P62318 126 aaKnown RBP2.39□□□□□ -2.03
PTCD3-205ENST00000464541 BTG2P78543 158 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 ZNF90Q03938 601 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 CCSMST1Q4G0I0 132 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 C10orf111Q8N326 155 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 RETNLBQ9BQ08 111 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 SLC35B3Q9H1N7 401 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 NIT2Q9NQR4 276 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 NDUFB11Q9NX14 153 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 BOKQ9UMX3 212 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-205ENST00000464541 MPC1Q9Y5U8 109 aa2.39□□□□□ -2.03
PTCD3-205ENST00000464541 PVALEFA0A1B0GWK0 134 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 OR51F1A6NGY5 319 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 HMSDA8MTL9 139 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 OR1I1O60431 355 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 OBSL1O75147 1896 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 TRACP01848 142 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 BAALC-AS2P0C853 105 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 HINT1P49773 126 aaPredicted RBP2.38□□□□□ -2.03
PTCD3-205ENST00000464541 TPPP2P59282 170 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 BLCAPP62952 87 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 ERHP84090 104 aaKnown RBP2.38□□□□□ -2.03
PTCD3-205ENST00000464541 CIRBPQ14011 172 aaKnown RBP2.38□□□□□ -2.03
PTCD3-205ENST00000464541 ARHGAP31Q2M1Z3 1444 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 FAM135BQ49AJ0 1406 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 CLLU1Q5K131 121 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 TEX261Q6UWH6 196 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 Q6ZQT0 140 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 OR2T35Q8NGX2 323 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 OR5AK2Q8NH90 309 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 SDF2Q99470 211 aa2.38□□□□□ -2.03
PTCD3-205ENST00000464541 METTL1Q9UBP6 276 aaKnown RBP2.38□□□□□ -2.03
PTCD3-205ENST00000464541 IGLV3-9A0A075B6K5 115 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 E7EQL1 145 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 M0R143 59 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 M0R233 179 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 MGST1P10620 155 aaKnown RBP2.37□□□□□ -2.03
PTCD3-205ENST00000464541 DEFA4P12838 97 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 PEBP1P30086 187 aaKnown RBP2.37□□□□□ -2.03
PTCD3-205ENST00000464541 CKS2P33552 79 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 NNATQ16517 81 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 LINC00311Q8N616 119 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 LINC00301Q8NCQ3 95 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 OR8B3Q8NGG8 313 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 HYLS1Q96M11 299 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 PSORS1C2Q9UIG4 136 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 DNAJC15Q9Y5T4 150 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 BCL9LQ86UU0 1499 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 FER1L6Q2WGJ9 1857 aa2.37□□□□□ -2.03
PTCD3-205ENST00000464541 MYOM3Q5VTT5 1437 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 TRAV12-2A0A075B6T6 113 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 hDV103S1A0JD37 113 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 ZNF736B4DX44 427 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-205ENST00000464541 G3V3Q6 166 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 CTSDP07339 412 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-205ENST00000464541 SLC25A4P12235 298 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 PKIAP61925 76 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 ZNF345Q14585 488 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 ZNF826PQ6ZT77 177 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 OR5AS1Q8N127 324 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 CCL4L1Q8NHW4 92 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 PSMF1Q92530 271 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 POP5Q969H6 163 aaKnown RBP2.36□□□□□ -2.03
PTCD3-205ENST00000464541 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
PTCD3-205ENST00000464541 NAA38Q9BRA0 125 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms