RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ZNF705GA8MUZ8 300 aaPredicted RBP9.26□□□□□ -0.93
XRN1-203ENST00000463916 HBE1P02100 147 aa9.26□□□□□ -0.93
XRN1-203ENST00000463916 PET100P0DJ07 73 aa9.26□□□□□ -0.93
XRN1-203ENST00000463916 GUK1Q16774 197 aa9.26□□□□□ -0.93
XRN1-203ENST00000463916 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
XRN1-203ENST00000463916 APLNQ9ULZ1 77 aa9.26□□□□□ -0.93
XRN1-203ENST00000463916 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 M0R3E3 92 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 INSP01308 110 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 AMBPP02760 352 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 AZU1P20160 251 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 RPP25LQ8N5L8 163 aaKnown RBP9.25□□□□□ -0.93
XRN1-203ENST00000463916 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
XRN1-203ENST00000463916 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 HIST1H1EP10412 219 aaKnown RBP9.25□□□□□ -0.93
XRN1-203ENST00000463916 Q5BKY6 102 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 BLNKQ8WV28 456 aa9.25□□□□□ -0.93
XRN1-203ENST00000463916 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 MED28Q9H204 178 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 FRAS1Q86XX4 4008 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 ZNF253O75346 499 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 CDKN1BP46527 198 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 LGALS9CQ6DKI2 356 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
XRN1-203ENST00000463916 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 PLAC8L1A1L4L8 177 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 EIF3GO75821 320 aaKnown RBP eCLIP9.23□□□□□ -0.93
XRN1-203ENST00000463916 OR10J4P0C629 311 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 FXYD5Q96DB9 178 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 ZNF503Q96F45 646 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 FUT9Q9Y231 359 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
XRN1-203ENST00000463916 C17orf112F2Z3M2 114 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 ERCC8Q13216 396 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 FFAR4Q5NUL3 377 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 LINC01587Q99440 93 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 NIPSNAP3BQ9BS92 247 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 OR51M1Q9H341 326 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 IFNA5P01569 189 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 HTN1P15515 57 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 PDE6HQ13956 83 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 SCGB1C1Q8TD33 95 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 KCNIP2Q9NS61 270 aa9.22□□□□□ -0.93
XRN1-203ENST00000463916 J3KRW8 73 aa9.21□□□□□ -0.93
XRN1-203ENST00000463916 TCTAP57738 103 aa9.21□□□□□ -0.93
XRN1-203ENST00000463916 ICAM4Q14773 271 aa9.21□□□□□ -0.93
XRN1-203ENST00000463916 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.93
XRN1-203ENST00000463916 PAXXQ9BUH6 204 aa9.21□□□□□ -0.93
XRN1-203ENST00000463916 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.93
XRN1-203ENST00000463916 TSPOP30536 169 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 TMEM256Q8N2U0 113 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 AGPAT4-IT1Q9H0P7 198 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 TAS2R60P59551 318 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
XRN1-203ENST00000463916 OR7C2O60412 319 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 RGS21Q2M5E4 152 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 AQP10Q96PS8 301 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 PRELID1Q9Y255 219 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 IGKV2-40A0A087WW87 121 aaPredicted RBP9.19□□□□□ -0.94
XRN1-203ENST00000463916 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 IGKV2D-40P01614 121 aaPredicted RBP9.19□□□□□ -0.94
XRN1-203ENST00000463916 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
XRN1-203ENST00000463916 HTN3P15516 51 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 OXA1LQ15070 435 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 RNASE8Q8TDE3 154 aaKnown RBP9.19□□□□□ -0.94
XRN1-203ENST00000463916 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 VGLL1Q99990 258 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
XRN1-203ENST00000463916 TEX48A0A1B0GUV7 120 aa9.18□□□□□ -0.94
XRN1-203ENST00000463916 H7BYZ3 331 aa9.18□□□□□ -0.94
XRN1-203ENST00000463916 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
XRN1-203ENST00000463916 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
XRN1-203ENST00000463916 DAD1P61803 113 aa9.18□□□□□ -0.94
XRN1-203ENST00000463916 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
XRN1-203ENST00000463916 RAB2AP61019 212 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 CD300CQ08708 224 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 C9orf47Q6ZRZ4 202 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 C20orf144Q9BQM9 153 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 G3V3Q6 166 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 M6PRP20645 277 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 LEPP41159 167 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 UBE2L3P68036 154 aaKnown RBP9.17□□□□□ -0.94
XRN1-203ENST00000463916 Q6ZQT7 251 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 HSD17B11Q8NBQ5 300 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
XRN1-203ENST00000463916 NDUFAF3Q9BU61 184 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms