RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
TMEM254-208ENST00000463209 IGLL5B9A064 214 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 MPDU1O75352 247 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 DUSP14O95147 198 aaKnown RBP6.17□□□□□ -1.42
TMEM254-208ENST00000463209 NDUFB4O95168 129 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 PET100P0DJ07 73 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 HTN1P15515 57 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 ERCC8Q13216 396 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 FFAR4Q5NUL3 377 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 S100A7AQ86SG5 101 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 RPP25LQ8N5L8 163 aaKnown RBP6.17□□□□□ -1.42
TMEM254-208ENST00000463209 C2CD4CQ8TF44 421 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 IGF2BP2-AS1Q96M15 143 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 CLUHP3Q96NS8 147 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 SLC50A1Q9BRV3 221 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
TMEM254-208ENST00000463209 YTHDF2Q9Y5A9 579 aaKnown RBP6.17□□□□□ -1.42
TMEM254-208ENST00000463209 TRBV19A0A075B6N1 114 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 HBE1P02100 147 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 HTN3P15516 51 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 CXCL2P19875 107 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 AZU1P20160 251 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 FAM222AQ5U5X8 452 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 FAM122CQ6P4D5 195 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 CHAC2Q8WUX2 184 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 TIMM9Q9Y5J7 89 aa6.16□□□□□ -1.42
TMEM254-208ENST00000463209 IGKV2-40A0A087WW87 121 aaPredicted RBP6.15□□□□□ -1.42
TMEM254-208ENST00000463209 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 TRAV10A0A0B4J240 114 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 C17orf112F2Z3M2 114 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
TMEM254-208ENST00000463209 IFNA5P01569 189 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 IGKV2D-40P01614 121 aaPredicted RBP6.15□□□□□ -1.42
TMEM254-208ENST00000463209 CT45A10P0DMU9 189 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 RAB2AP61019 212 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 RRN3P1Q2M238 152 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 RGS21Q2M5E4 152 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 GFI1BQ5VTD9 330 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 OR10J6PQ8NGY7 276 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 SCGB1C1Q8TD33 95 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 FXYD5Q96DB9 178 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 NEU1Q99519 415 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 TMEM14CQ9P0S9 112 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 DKK2Q9UBU2 259 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 APLNQ9ULZ1 77 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 RNF24Q9Y225 148 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 FUT9Q9Y231 359 aa6.15□□□□□ -1.42
TMEM254-208ENST00000463209 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.43
TMEM254-208ENST00000463209 IGHV4-4A0A075B6R2 117 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 PLAC8L1A1L4L8 177 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 SMIM9A6NGZ8 99 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 OR7C2O60412 319 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 HIST1H1EP10412 219 aaKnown RBP6.14□□□□□ -1.43
TMEM254-208ENST00000463209 CDKN1BP46527 198 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 UBE2L3P68036 154 aaKnown RBP6.14□□□□□ -1.43
TMEM254-208ENST00000463209 ICAM4Q14773 271 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 GUK1Q16774 197 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 Q6ZQT7 251 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 HSD17B11Q8NBQ5 300 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 LINC01587Q99440 93 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 PAXXQ9BUH6 204 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 SH3BGRL3Q9H299 93 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
TMEM254-208ENST00000463209 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 FXYD6-FXYD2A0A087WZ82 144 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 TRAV12-3A0A0B4J271 114 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 C11orf94C9JXX5 98 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 AMBPP02760 352 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 DEFB130BP0DP73 79 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 DEFB130AP0DP74 79 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 PRR9Q5T870 116 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 Q8TAT8 98 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 VGLL1Q99990 258 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 MRPL32Q9BYC8 188 aaKnown RBP6.13□□□□□ -1.43
TMEM254-208ENST00000463209 KCNIP2Q9NS61 270 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 RPH3ALQ9UNE2 315 aa6.13□□□□□ -1.43
TMEM254-208ENST00000463209 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 G3V3Q6 166 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 ZNF253O75346 499 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 GIPP09681 153 aaPredicted RBP6.12□□□□□ -1.43
TMEM254-208ENST00000463209 NBEAP1P0C6P0 100 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 RANP62826 216 aaKnown RBP6.12□□□□□ -1.43
TMEM254-208ENST00000463209 CD300CQ08708 224 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 OXA1LQ15070 435 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 OR2T35Q8NGX2 323 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 NIPSNAP3BQ9BS92 247 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 AGPAT4-IT1Q9H0P7 198 aa6.12□□□□□ -1.43
TMEM254-208ENST00000463209 RNF222A6NCQ9 220 aa6.11□□□□□ -1.43
TMEM254-208ENST00000463209 ATP6V0CP27449 155 aa6.11□□□□□ -1.43
TMEM254-208ENST00000463209 RNASE4P34096 147 aaKnown RBP6.11□□□□□ -1.43
TMEM254-208ENST00000463209 LEPP41159 167 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms