RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 NAT8Q9UHE5 227 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 SLC35A3Q9Y2D2 325 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 V9GYS6 101 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 SDK2Q58EX2 2172 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 TOPAZ1Q8N9V7 1692 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 BCORQ6W2J9 1755 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 KIDINS220Q9ULH0 1771 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 ARFGEF2Q9Y6D5 1785 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PIK3C2BO00750 1634 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 MON2Q7Z3U7 1717 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TOGARAM1Q9Y4F4 1720 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 AFDNP55196 1824 aaKnown RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 DOCK2Q92608 1830 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TRAV7A0A075B6U4 112 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 A0A096LPI6 279 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 LOC285095A0A1B0GVY8 99 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 IRGMA1A4Y4 181 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 CREBL2O60519 120 aaPredicted RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 NDUFC2O95298 119 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 APOC2P02655 101 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 PMP2P02689 132 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 SRIP30626 198 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 FUSP35637 526 aaKnown RBP eCLIP1.92□□□□□ -2.1
USH2A-203ENST00000463147 POLR2JP52435 117 aaKnown RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 NDUFA6P56556 154 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TPI1P60174 286 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 SNRPFP62306 86 aaKnown RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 GNG5P63218 68 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 AKR1C1Q04828 323 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 IBA57Q5T440 356 aaKnown RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 TMEM244Q5VVB8 128 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 RPL22L1Q6P5R6 122 aaKnown RBP1.92□□□□□ -2.1
USH2A-203ENST00000463147 DYNAPQ8N1N2 210 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TOMM5Q8N4H5 51 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 OR8J3Q8NGG0 315 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 OR13D1Q8NGV5 346 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 GPR146Q96CH1 333 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 CCDC115Q96NT0 180 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 FXYD6Q9H0Q3 95 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 RASL12Q9NYN1 266 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 GSKIPQ9P0R6 139 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 COMMD3Q9UBI1 195 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 STRCQ7RTU9 1775 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 DLEC1Q9Y238 1755 aa1.92□□□□□ -2.1
USH2A-203ENST00000463147 TJP1Q07157 1748 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 PKD1L3Q7Z443 1732 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 NCKAP5O14513 1909 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 DENND4CQ5VZ89 1909 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 C5P01031 1676 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 DUOX1Q9NRD9 1551 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 COL1A1P02452 1464 aaPredicted RBP1.91□□□□□ -2.1
USH2A-203ENST00000463147 PXDNQ92626 1479 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 TRAV4A0A0B4J268 109 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 SNRPGP15A8MWD9 76 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 PPP5D1E7EU14 171 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 K7EP13 123 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 FXYD1O00168 92 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 CYB5BO43169 146 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 IL5P05113 134 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 UCHL1P09936 223 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 PIPP12273 146 aaPredicted RBP1.91□□□□□ -2.1
USH2A-203ENST00000463147 NFYBP25208 207 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 CDC42P60953 191 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 MAXP61244 160 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 SUPT4H1P63272 117 aaKnown RBP1.91□□□□□ -2.1
USH2A-203ENST00000463147 DEFB115Q30KQ5 88 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
USH2A-203ENST00000463147 COL5A1-AS1Q5SY13 56 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 Q6ZS52 159 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 GRINAQ7Z429 371 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 SLC35E3Q7Z769 313 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 ACBD7Q8N6N7 88 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 MCEEQ96PE7 176 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 Q9BRP9 147 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 ADAT1Q9BUB4 502 aaKnown RBP1.91□□□□□ -2.1
USH2A-203ENST00000463147 SNHG12Q9BXW3 62 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 NDUFB11Q9NX14 153 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 TVP23BQ9NYZ1 205 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 OR52A1Q9UKL2 312 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 ZFP30Q9Y2G7 519 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 AKAP11Q9UKA4 1901 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 TNS3Q68CZ2 1445 aa1.91□□□□□ -2.1
USH2A-203ENST00000463147 PLXNA3P51805 1871 aa1.9□□□□□ -2.1
USH2A-203ENST00000463147 SCN11AQ9UI33 1791 aa1.9□□□□□ -2.1
USH2A-203ENST00000463147 IGKV3D-11A0A0A0MRZ8 115 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 A0A0G2JQZ4 141 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 FABP5P3A8MUU1 101 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 H7C1C5 153 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 K7ERU9 68 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 IGF2P01344 180 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 IGKV1-16P04430 117 aa1.9□□□□□ -2.11
USH2A-203ENST00000463147 TPT1P13693 172 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms