RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 GATA3P23771 443 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF418Q8TF45 676 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-204ENST00000462279 GLMPQ8WWB7 406 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 GAFA1Q96PS6 74 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 TRGV9Q99603 122 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 ATMQ13315 3056 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 MT-ATP8P03928 68 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 GATA1P15976 413 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-204ENST00000462279 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 TTC9CQ8N5M4 171 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 MAPKAPK5-AS1Q8N8E1 139 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 MAFAQ8NHW3 353 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-204ENST00000462279 RASL11BQ9BPW5 248 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
ERCC8-204ENST00000462279 RAI1Q7Z5J4 1906 aaPredicted RBP6.38□□□□□ -1.39
ERCC8-204ENST00000462279 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 NDUFA3O95167 84 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 DLX1P56177 255 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 CCL8P80075 99 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TNFAIP6P98066 277 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TCTEX1D4Q5JR98 221 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 Q6AWC8 147 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF833PQ6ZTB9 187 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 SRSF8Q9BRL6 282 aaKnown RBP6.37□□□□□ -1.39
ERCC8-204ENST00000462279 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 DPM2O94777 84 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 CNTFRP26992 372 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 RPL27AP46776 148 aaKnown RBP6.37□□□□□ -1.39
ERCC8-204ENST00000462279 KLF17Q5JT82 389 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TMEM75Q8N9X5 138 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 C9orf106Q8NAJ2 232 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 Q8TAT8 98 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TMEM158Q8WZ71 300 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 PTH2Q96A98 100 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 FER1L6-AS2Q96M78 137 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 NGBQ9NPG2 151 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 MRPL35Q9NZE8 188 aaKnown RBP6.37□□□□□ -1.39
ERCC8-204ENST00000462279 HIGD1BQ9P298 99 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 SH2D1AO60880 128 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF493Q6ZR52 646 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TM2D2Q9BX73 214 aa6.37□□□□□ -1.39
ERCC8-204ENST00000462279 TRBV19A0A075B6N1 114 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 IGKV2-40A0A087WW87 121 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-204ENST00000462279 TGFAP01135 160 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 LHBP01229 141 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 IGKV2D-40P01614 121 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-204ENST00000462279 ORM1P02763 201 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 RNF183Q96D59 192 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 CYSLTR1Q9Y271 337 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 ABCA4P78363 2273 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 SCNM1Q9BWG6 230 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 SIT1Q9Y3P8 196 aa6.36□□□□□ -1.39
ERCC8-204ENST00000462279 IGLV2-23P01705 113 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 FOXI1Q12951 378 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 RRN3P1Q2M238 152 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 PMS2CLQ68D20 193 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 IGFL4Q6B9Z1 124 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 EP300Q09472 2414 aaPredicted RBP6.35□□□□□ -1.39
ERCC8-204ENST00000462279 IL4P05112 153 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 PSMB2P49721 201 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 SIGLEC15Q6ZMC9 328 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 MDS2Q8NDY4 140 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF502Q8TBZ5 544 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 KLK15Q9H2R5 256 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 RALYQ9UKM9 306 aaKnown RBP6.35□□□□□ -1.39
ERCC8-204ENST00000462279 LAMA5O15230 3695 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 CRYGCP07315 174 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
ERCC8-204ENST00000462279 XGP55808 180 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 PAX8Q06710 450 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 PLGLAQ15195 96 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 RPEQ96AT9 228 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 U3KQK5 164 aa6.35□□□□□ -1.39
ERCC8-204ENST00000462279 NCBP2LA6PVI3 153 aaKnown RBP6.34□□□□□ -1.39
ERCC8-204ENST00000462279 TM4SF5O14894 197 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 PROCRQ9UNN8 238 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 LINC00312Q9Y6C7 94 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 MGAQ8IWI9 3026 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 INS-IGF2F8WCM5 200 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 H3BVH4 76 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 IGLV1-44P01699 117 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 TMEM164Q5U3C3 297 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 TMEM200BQ69YZ2 307 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 ZNF71Q9NQZ8 489 aaPredicted RBP6.34□□□□□ -1.39
ERCC8-204ENST00000462279 PRO0461Q9UI25 63 aa6.34□□□□□ -1.39
ERCC8-204ENST00000462279 EFNA4P52798 201 aa6.34□□□□□ -1.4
ERCC8-204ENST00000462279 NFE4Q86UQ8 179 aa6.34□□□□□ -1.4
ERCC8-204ENST00000462279 GATD1Q8NB37 220 aa6.34□□□□□ -1.4
ERCC8-204ENST00000462279 CDIP1Q9H305 208 aa6.34□□□□□ -1.4
ERCC8-204ENST00000462279 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.4
ERCC8-204ENST00000462279 AKAP6Q13023 2319 aa6.33□□□□□ -1.4
ERCC8-204ENST00000462279 IGHV3OR16-8A0A075B7F1 116 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms