RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 RPH3ALQ9UNE2 315 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 DOPEY2Q9Y3R5 2298 aa9.75□□□□□ -0.85
COL4A6-204ENST00000461897 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 A0A1B0GW15 77 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 H3BRN7 92 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 J3QKU1 62 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 SLC25A16P16260 332 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 LYZP61626 148 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 LEMD1Q68G75 181 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 RELQ04864 619 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-204ENST00000461897 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 PET117Q6UWS5 81 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 RASL11BQ9BPW5 248 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 GSX1Q9H4S2 264 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-204ENST00000461897 CLEC5AQ9NY25 188 aa9.74□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV3OR16-10A0A075B7F0 116 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.73□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV3-21A0A0B4J1V1 117 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 H3BTX0 84 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 K7EIM0 57 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 CHEK1O14757 476 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
COL4A6-204ENST00000461897 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 SIGLEC15Q6ZMC9 328 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
COL4A6-204ENST00000461897 CIARTQ8N365 385 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-204ENST00000461897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL4A6-204ENST00000461897 TRAV8-1A0A0A6YYK1 113 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV1-69DA0A0B4J2H0 117 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 A0A1B0GUT8 65 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV1-69P01742 117 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 TMEM11P17152 192 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 Q6AWC8 147 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-204ENST00000461897 B4DSR2 109 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 EXOC3-AS1Q8N2X6 119 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 ZC2HC1AQ96GY0 325 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 ZNF48Q96MX3 618 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-204ENST00000461897 TMEM191AQ9H0A3 160 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 BEX4Q9NWD9 120 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-204ENST00000461897 ZANQ9Y493 2812 aa9.72□□□□□ -0.85
COL4A6-204ENST00000461897 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.85
COL4A6-204ENST00000461897 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 NCBP2LA6PVI3 153 aaKnown RBP9.71□□□□□ -0.85
COL4A6-204ENST00000461897 M0QZ24 198 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 CNIH1O95406 144 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 HLA-DRB1P01911 266 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 FAM106CPP0CH98 169 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 IGHV4-38-2P0DP08 117 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 HINT1P49773 126 aaPredicted RBP9.71□□□□□ -0.85
COL4A6-204ENST00000461897 NDPQ00604 133 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 RIGQ13278 110 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 PDE6HQ13956 83 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 DEFB113Q30KQ7 82 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 BRD3OSQ6XYD6 125 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 ARL6IP6Q8N6S5 226 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 PSMG3-AS1Q96PY0 264 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 MS4A6AQ9H2W1 248 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 HIF1ANQ9NWT6 349 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.85
COL4A6-204ENST00000461897 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.86
COL4A6-204ENST00000461897 K7EQM0 130 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 PSG3Q16557 428 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF493Q6ZR52 646 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 Q8N9W7 124 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF738Q8NE65 137 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 PSG8Q9UQ74 426 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 AVPP01185 164 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 LRRC75A-AS1Q8N1F1 130 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 RNF125Q96EQ8 232 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF469Q96JG9 3925 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-204ENST00000461897 CR1P17927 2039 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 ABCA1O95477 2261 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 TRAV30A0A087WSZ9 112 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF562Q6V9R5 426 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 Q71RC1 249 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-204ENST00000461897 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 ZNF414Q96IQ9 312 aa9.69□□□□□ -0.86
COL4A6-204ENST00000461897 CCL25O15444 150 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 TCF21O43680 179 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 CRIP1P50238 77 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 KLF17Q5JT82 389 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-204ENST00000461897 Q5PR19 223 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
COL4A6-204ENST00000461897 LINC01356Q8N9X3 169 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms