RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 INSP01308 110 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 OR10J4P0C629 311 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 RBMY1A1P0DJD3 496 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 RBMY1CP0DJD4 496 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 ATP6V0CP27449 155 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 FAM122CQ6P4D5 195 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 ZNF705AQ6ZN79 300 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 NEU1Q99519 415 aa7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 PSMG3Q9BT73 122 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-213ENST00000461577 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 G3V3Q6 166 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 SMLR1H3BR10 107 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 ARPC5O15511 151 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 NDUFB4O95168 129 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 HBE1P02100 147 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 MBP02144 154 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 NANOS2P60321 138 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 RAB2AP61019 212 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 UBE2L3P68036 154 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 ICAM4Q14773 271 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 RPL7L1Q6DKI1 246 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 C1orf158Q8N1D5 194 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 EXOC3-AS1Q8N2X6 119 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 OR10G4Q8NGN3 311 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 OR10G9Q8NGN4 311 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 OR10G7Q8NGN6 311 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 OR2G3Q8NGZ4 309 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 FXYD5Q96DB9 178 aa7.65□□□□□ -1.18
TRAPPC12-213ENST00000461577 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 M0R3E3 92 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 TAAR5O14804 337 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 EIF3GO75821 320 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 TSPOP30536 169 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 CDKN1BP46527 198 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 CDC34P49427 236 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 SERF2P84101 59 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 RRN3P1Q2M238 152 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 BAP18Q8IXM2 172 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 PHLDA1Q8WV24 401 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 GNPNAT1Q96EK6 184 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 CSMD3Q7Z407 3707 aa7.64□□□□□ -1.19
TRAPPC12-213ENST00000461577 NPIPB6E9PJ23 425 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 LEPP41159 167 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 CSN1S1P47710 185 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 EMP1P54849 157 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 CEMP1Q6PRD7 247 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 LYPD1Q8N2G4 141 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 TMEM256Q8N2U0 113 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 RPP25LQ8N5L8 163 aaKnown RBP7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 ZNF503Q96F45 646 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 PHYHIPLQ96FC7 376 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 LINC01587Q99440 93 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 SH3BGRL3Q9H299 93 aa7.63□□□□□ -1.19
TRAPPC12-213ENST00000461577 LOC102723971A0A1B0GUV8 181 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 J3KRW8 73 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 JTBO76095 146 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 CT45A10P0DMU9 189 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 ERCC8Q13216 396 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 LINC00477Q96M19 166 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 ODF3Q96PU9 254 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 ACTR3CQ9C0K3 210 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 Q9H3A6 140 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 CELA1Q9UNI1 258 aa7.62□□□□□ -1.19
TRAPPC12-213ENST00000461577 IGKV2-40A0A087WW87 121 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 HMSDA8MTL9 139 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 ZNF705GA8MUZ8 300 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 IGKV2D-40P01614 121 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 SPART-AS1P0CW21 52 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 ARL14EPLP0DKL9 152 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 FAM74A1Q5RGS3 127 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 AKR1C8PQ5T2L2 129 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 ARPC5LQ9BPX5 153 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 C20orf144Q9BQM9 153 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 OTORQ9NRC9 128 aa7.61□□□□□ -1.19
TRAPPC12-213ENST00000461577 A0A0D9SG52 128 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 TEX48A0A1B0GUV7 120 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 PGPA6NDG6 321 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 C11orf94C9JXX5 98 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 STAG3L2P0CL84 134 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 STAG3L3P0CL85 134 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 HTN1P15515 57 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 TAS2R60P59551 318 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 ZNF345Q14585 488 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 GFI1BQ5VTD9 330 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 C9orf47Q6ZRZ4 202 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 ZNF767PQ75MW2 155 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 KCNRGQ8N5I3 272 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 CMTM2Q8TAZ6 248 aa7.6□□□□□ -1.19
TRAPPC12-213ENST00000461577 RXFP4Q8TDU9 374 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms