RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 EFCAB11Q9BUY7 163 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 NINQ8N4C6 2090 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 ZGRF1Q86YA3 2104 aa1□□□□□ -2.25
VCL-203ENST00000461383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1□□□□□ -2.25
VCL-203ENST00000461383 A0A087WSZ3 146 aa1□□□□□ -2.25
VCL-203ENST00000461383 IGLV3-32A0A0A0MS00 114 aa1□□□□□ -2.25
VCL-203ENST00000461383 GABARAPH6UMI1 98 aa1□□□□□ -2.25
VCL-203ENST00000461383 KLF7O75840 302 aaPredicted RBP1□□□□□ -2.25
VCL-203ENST00000461383 COX7CP15954 63 aa1□□□□□ -2.25
VCL-203ENST00000461383 S100A11P31949 105 aa1□□□□□ -2.25
VCL-203ENST00000461383 SDC2P34741 201 aa1□□□□□ -2.25
VCL-203ENST00000461383 VMA21Q3ZAQ7 101 aa1□□□□□ -2.25
VCL-203ENST00000461383 SPRNQ5BIV9 151 aa1□□□□□ -2.25
VCL-203ENST00000461383 SAMD13Q5VXD3 122 aa1□□□□□ -2.25
VCL-203ENST00000461383 LINC00322Q6ZN03 302 aaPredicted RBP1□□□□□ -2.25
VCL-203ENST00000461383 OR4B1Q8NGF8 309 aa1□□□□□ -2.25
VCL-203ENST00000461383 Q8TAT8 98 aa1□□□□□ -2.25
VCL-203ENST00000461383 CARD19Q96LW7 228 aa1□□□□□ -2.25
VCL-203ENST00000461383 MRPL40Q9NQ50 206 aaKnown RBP1□□□□□ -2.25
VCL-203ENST00000461383 SMPXQ9UHP9 88 aa1□□□□□ -2.25
VCL-203ENST00000461383 TNFSF18Q9UNG2 199 aa1□□□□□ -2.25
VCL-203ENST00000461383 TPRKBQ9Y3C4 175 aa1□□□□□ -2.25
VCL-203ENST00000461383 ASB4Q9Y574 426 aa1□□□□□ -2.25
VCL-203ENST00000461383 ASCC3Q8N3C0 2202 aaKnown RBP1□□□□□ -2.25
VCL-203ENST00000461383 H0YJX3 145 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 SPTBP11277 2137 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 MRPS36P82909 103 aaKnown RBP0.99□□□□□ -2.25
VCL-203ENST00000461383 PSG9Q00887 426 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 HAGHLQ6PII5 290 aaPredicted RBP0.99□□□□□ -2.25
VCL-203ENST00000461383 TMEM14EPQ6UXP3 125 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 RMND5BQ96G75 393 aaPredicted RBP0.99□□□□□ -2.25
VCL-203ENST00000461383 KRTAP4-1Q9BYQ7 146 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 ZCCHC11Q5TAX3 1644 aaKnown RBP0.99□□□□□ -2.25
VCL-203ENST00000461383 TRPM1Q7Z4N2 1603 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 FANCMQ8IYD8 2048 aa0.99□□□□□ -2.25
VCL-203ENST00000461383 RTL9Q8NET4 1388 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 PTPRDP23468 1912 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 C9orf170A2RU37 121 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 C5orf67F2Z3F1 127 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 TSTD3H0UI37 97 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 B2MP61769 119 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 TMEM128Q5BJH2 165 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 LINC00305Q7Z4B0 112 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 TMEM35BQ8NCS4 154 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 OR5H6Q8NGV6 325 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 OR10AG1Q8NH19 301 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 OR4C12Q96R67 309 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 LXNQ9BS40 222 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 DDA1Q9BW61 102 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 LRTM1Q9HBL6 345 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 ADGRB2O60241 1585 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 COL24A1Q17RW2 1714 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 PEAK1Q9H792 1746 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 UNC13AQ9UPW8 1703 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 TRAPPC8Q9Y2L5 1435 aa0.98□□□□□ -2.25
VCL-203ENST00000461383 GNG14A0A1W2PPG7 69 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 H7BYZ3 331 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 NCR3O14931 201 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 FABP4P15090 132 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 DR1Q01658 176 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 DIAPH2-AS1Q14236 149 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 PLPP5Q8NEB5 264 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 OR9Q1Q8NGQ5 310 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 THEM6Q8WUY1 208 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 SKA2Q8WVK7 121 aaPredicted RBP0.97□□□□□ -2.25
VCL-203ENST00000461383 ZC2HC1AQ96GY0 325 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 PRELID3AQ96N28 172 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 CST11Q9H112 138 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 TRAPPC2LQ9UL33 140 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 CECR2Q9BXF3 1484 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 FER1L6Q2WGJ9 1857 aa0.97□□□□□ -2.25
VCL-203ENST00000461383 NISCHQ9Y2I1 1504 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 PPYP01298 95 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 TPT1P13693 172 aaKnown RBP0.96□□□□□ -2.26
VCL-203ENST00000461383 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
VCL-203ENST00000461383 HRCT1Q6UXD1 115 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 TOMM20LQ6UXN7 152 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 TEX29Q8N6K0 151 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 OR5AK2Q8NH90 309 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 AMELYQ99218 206 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 WFDC10AQ9H1F0 79 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 MED31Q9Y3C7 131 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
VCL-203ENST00000461383 MUC4Q99102 2169 aa0.96□□□□□ -2.26
VCL-203ENST00000461383 TET1Q8NFU7 2136 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 MYH1P12882 1939 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 E9PCH4 1651 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 TRAV23DV6A0A075B6W5 121 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 TRAV13-1A0A0B4J241 112 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 JMJD7-PLA2G4BH0Y9G9 81 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 H3BMG7 143 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 POLR2HP52434 150 aaKnown RBP0.95□□□□□ -2.26
VCL-203ENST00000461383 KRTAP26-1Q6PEX3 210 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 PSMF1Q92530 271 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 HSPB8Q9UJY1 196 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 NDUFAF1Q9Y375 327 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 HSPB11Q9Y547 144 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 KIAA1107Q9UPP5 1409 aa0.95□□□□□ -2.26
VCL-203ENST00000461383 ARL5CA6NH57 179 aa0.94□□□□□ -2.26
VCL-203ENST00000461383 TRACP01848 142 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms