RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 TRAV24A0A0B4J272 114 aa5.05□□□□□ -1.6
HLA-DQA1-205ENST00000460633 A0A1B0GUT8 65 aa5.05□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
HLA-DQA1-205ENST00000460633 KNTC1P50748 2209 aa5.05□□□□□ -1.6
HLA-DQA1-205ENST00000460633 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SPRY2O43597 315 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 WDR82Q6UXN9 313 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 RHPN1-AS1Q9BWJ2 59 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 CYSLTR1Q9Y271 337 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TMEM219Q86XT9 240 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 WDR83OSQ9Y284 106 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 A0A0G2JRQ6 117 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 IGKV1-5P01602 117 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 DEFB131AP59861 70 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 KLRD1Q13241 179 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 LYPD1Q8N2G4 141 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 CHCHD1Q96BP2 118 aaKnown RBP5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 ZC2HC1AQ96GY0 325 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 LRRK1Q38SD2 2015 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 B5MCH6 92 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 PRR30Q53SZ7 412 aaPredicted RBP5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TREML4Q6UXN2 200 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SLC25A48Q6ZT89 311 aaKnown RBP5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 C11orf45Q8TAV5 145 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 NEUROG1Q92886 237 aa5.04□□□□□ -1.6
HLA-DQA1-205ENST00000460633 IGKV2D-24A0A075B6R9 120 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 INAFM2P0DMQ5 153 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 PYYP10082 97 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 C4orf3Q8WVX3 66 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 MS4A6AQ9H2W1 248 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 PNRC2Q9NPJ4 139 aaKnown RBP5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TRAV10A0A0B4J240 114 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 CD28P10747 220 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 ZNF497Q6ZNH5 498 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 CFHR4Q92496 578 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 CACNA1IQ9P0X4 2223 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 H3BMM0 161 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TFF1P04155 84 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 ZNF726P1Q15940 193 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TMEM14EPQ6UXP3 125 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SMIM2Q9BVW6 85 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 MRPL36Q9P0J6 103 aaKnown RBP5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 LYNX1G3V0Z9 82 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 NDUFA3O95167 84 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 LYNX1P0DP58 116 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 COL8A2P25067 703 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 HSD52Q0P140 79 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 DEFB112Q30KQ8 113 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 C6orf226Q5I0X4 101 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 Q6ZRM9 215 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 A0A0G2JMM0 328 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 A0A1W2PPB8 328 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 KIR3DP1A8MWS1 328 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 IGLC2P0DOY2 106 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TCTEX1D4Q5JR98 221 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 TMEM200BQ69YZ2 307 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 ATP6V0E2Q8NHE4 81 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 LYPD6BQ8NI32 183 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 Q9H3A6 140 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SIGLEC8Q9NYZ4 499 aa5.03□□□□□ -1.6
HLA-DQA1-205ENST00000460633 SMIM9A6NGZ8 99 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 M0R381 172 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 IGHV3-23P01764 117 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 PLNP26678 52 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 SRSF6Q13247 344 aaKnown RBP5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 GUSBP1Q15486 140 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 ZNF474Q6S9Z5 364 aaPredicted RBP5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 STPG4Q8N801 248 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 MGST2Q99735 147 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 CHAC1Q9BUX1 264 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 WIPF3A6NGB9 483 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 LY6G6DO95868 133 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 C1orf229Q6ZS94 237 aaPredicted RBP5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 ORMDL3Q8N138 153 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 SCGB3A1Q96QR1 104 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 TOMM40O96008 361 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 GAGE5Q13069 117 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 GAGE6Q13070 117 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 C5orf47Q569G3 176 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 PLA2G2EQ9NZK7 142 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 EPDR1Q9UM22 224 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 SAA1P0DJI8 122 aaPredicted RBP5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 B9D2Q9BPU9 175 aa5.02□□□□□ -1.61
HLA-DQA1-205ENST00000460633 TMEM50AO95807 157 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 PRB4P10163 310 aaPredicted RBP5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 SRSF1Q07955 248 aaKnown RBP eCLIP5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 GAGE13Q4V321 117 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 Q6ZVH6 145 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 NUP35Q8NFH5 326 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 LIME1Q9H400 295 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 INAFM1C9JVW0 142 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 KIR3DS1Q14943 382 aa5.01□□□□□ -1.61
HLA-DQA1-205ENST00000460633 FAM231BA6NCW3 169 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms