RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 FAT1Q14517 4588 aa1.18□□□□□ -2.22
RFC4-211ENST00000460408 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
RFC4-211ENST00000460408 IGLV3-9A0A075B6K5 115 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 hCG_1818297A0A087WSY0 165 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 TMED7-TICAM2A0A0A6YYA0 188 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 A0A1W2PQD3 144 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 CST8O60676 142 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 RPP14O95059 124 aaKnown RBP1.17□□□□□ -2.22
RFC4-211ENST00000460408 IFNA5P01569 189 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 MPC1LP0DKB6 136 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 HIST1H1TP22492 207 aaPredicted RBP1.17□□□□□ -2.22
RFC4-211ENST00000460408 S100A1P23297 94 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 RPL22P35268 128 aaKnown RBP1.17□□□□□ -2.22
RFC4-211ENST00000460408 CDKN2CP42773 168 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 MARCKSL1P49006 195 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 TAS2R30P59541 319 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 SPCS3P61009 180 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 HLA-DRB3P79483 266 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 CCL8P80075 99 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 PLCXD2Q0VAA5 305 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 STX5Q13190 355 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 MED21Q13503 144 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 TMEM155Q4W5P6 130 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 GID4Q8IVV7 300 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 Q8N2B8 174 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 Q8N402 240 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 C15orf53Q8NAA6 179 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 OR8B3Q8NGG8 313 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 OR4X1Q8NH49 305 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 OR10J5Q8NHC4 309 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 SFRP2Q96HF1 295 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 CEP19Q96LK0 163 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 TMEM109Q9BVC6 243 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 PCBD2Q9H0N5 130 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 ARHGAP32A7KAX9 2087 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 LRP2P98164 4655 aa1.17□□□□□ -2.22
RFC4-211ENST00000460408 DNAH5Q8TE73 4624 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 A0A087WUU8 490 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 A0A087X0T9 212 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 IGHV1-18A0A0C4DH31 117 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 A0A0J9YW62 118 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 A0A1B0GVG6 124 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 C5orf49A4QMS7 147 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 ARRDC5A6NEK1 342 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 C9JCJ5 164 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 E5RI56 91 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 H3BSH0 61 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 H3BUX3 64 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 APOC4-APOC2K7ER74 178 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 UBE2L6O14933 153 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 ACOX3O15254 700 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 MRPL33O75394 65 aaKnown RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 IFNA10P01566 189 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 APOC2P02655 101 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 SMR3BP02814 79 aaPredicted RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 FAM228BP0C875 321 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 C8orf88P0DMB2 117 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 OGNP20774 298 aaKnown RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 HSD11B1P28845 292 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 AP3S2P59780 193 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 PSPHP78330 225 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 HOXC5Q00444 222 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 ZNF90Q03938 601 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 PRDX4Q13162 271 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 LRRC75BQ2VPJ9 315 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 Q6ZRN7 208 aaPredicted RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 Q6ZTI0 123 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 C3orf62Q6ZUJ4 267 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 NAA40Q86UY6 237 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 GPHB5Q86YW7 130 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 PACRGLQ8N7B6 248 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 EEF1AKMT1Q8WVE0 214 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 LZICQ8WZA0 190 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 CMTM5Q96DZ9 223 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 ZHX1-C8orf76Q96EF9 292 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 MRPS24Q96EL2 167 aaKnown RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 ZNF625Q96I27 306 aaPredicted RBP1.16□□□□□ -2.22
RFC4-211ENST00000460408 CCDC42Q96M95 316 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 PPP1R2P1Q96PQ5 205 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 AIF1LQ9BQI0 150 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 CXorf21Q9HAI6 301 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 HES4Q9HCC6 221 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 NKIRAS1Q9NYS0 192 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 MED11Q9P086 117 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 TNCP24821 2201 aa1.16□□□□□ -2.22
RFC4-211ENST00000460408 MIF4GDA9UHW6 222 aaKnown RBP1.15□□□□□ -2.23
RFC4-211ENST00000460408 LINC00587B1AMM8 73 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 LRRN3E7EW58 273 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 NPFFO15130 113 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 FADS1O60427 444 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 DHFRP00374 187 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 NPYP01303 97 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 IFNA21P01568 189 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 IFNA17P01571 189 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 C8GP07360 202 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 GLRXP35754 106 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 SSR2P43308 183 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 GABRA2P47869 451 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms