RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 STAG3L3P0CL85 134 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 PYYP10082 97 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 HLA-DRB4P13762 266 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 HAGHQ16775 308 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
VPS45-204ENST00000460366 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 LYPD1Q8N2G4 141 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 ZNF503Q96F45 646 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 SAV1Q9H4B6 383 aaPredicted RBP7.32□□□□□ -1.24
VPS45-204ENST00000460366 HLA-DRB4X5D2U9 266 aa7.32□□□□□ -1.24
VPS45-204ENST00000460366 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 CTXND1A0A1B0GTU2 59 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 A8MTW9 85 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 NDUFB4O95168 129 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 MORN3Q6PF18 240 aaPredicted RBP7.31□□□□□ -1.24
VPS45-204ENST00000460366 DPPA3Q6W0C5 159 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 ARL6IP6Q8N6S5 226 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 SUN5Q8TC36 379 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 CSTL1Q9H114 145 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 TGP01266 2768 aa7.31□□□□□ -1.24
VPS45-204ENST00000460366 A0A0J9YX75 114 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 H3BTX0 84 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 SLC17A3O00476 420 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 DUSP14O95147 198 aaKnown RBP7.3□□□□□ -1.24
VPS45-204ENST00000460366 CXorf1O96002 111 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 SNRPCP09234 159 aaKnown RBP7.3□□□□□ -1.24
VPS45-204ENST00000460366 OR10J4P0C629 311 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 RAB5CP51148 216 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 NUTF2P61970 127 aaKnown RBP7.3□□□□□ -1.24
VPS45-204ENST00000460366 UBE2L3P68036 154 aaKnown RBP7.3□□□□□ -1.24
VPS45-204ENST00000460366 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 Q6ZWC4 215 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 RNF182Q8N6D2 247 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 ZNF738Q8NE65 137 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 BLNKQ8WV28 456 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 RPUSD4Q96CM3 377 aaKnown RBP7.3□□□□□ -1.24
VPS45-204ENST00000460366 TM2D3Q9BRN9 247 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 AAMDCQ9H7C9 122 aa7.3□□□□□ -1.24
VPS45-204ENST00000460366 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 RPL35AP18077 110 aaKnown RBP7.29□□□□□ -1.24
VPS45-204ENST00000460366 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 GCHFRP30047 84 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 ZNF726P1Q15940 193 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 OR8A1Q8NGG7 326 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 TMED6Q8WW62 240 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 MBD3L1Q8WWY6 194 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 PHYHIPLQ96FC7 376 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 ASCL2Q99929 193 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 SPATA25Q9BR10 227 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 ZMAT4Q9H898 229 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 TMEM167BQ9NRX6 74 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 TP53TG1Q9Y2A0 90 aa7.29□□□□□ -1.24
VPS45-204ENST00000460366 HMGB3O15347 200 aaKnown RBP7.28□□□□□ -1.24
VPS45-204ENST00000460366 SULT1A2P50226 295 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 GDF5OSQ5U4N7 250 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 RXFP4Q8TDU9 374 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 C1QTNF4Q9BXJ3 329 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 AGRNO00468 2067 aa7.28□□□□□ -1.24
VPS45-204ENST00000460366 MAP1LC3B2A6NCE7 125 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 ZNF705FA8MVS1 300 aaPredicted RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 F6UB75 175 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 RGS13O14921 159 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 EIF3GO75821 320 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS45-204ENST00000460366 AMBPP02760 352 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 GIG44P09565 113 aaPredicted RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 CSN1S1P47710 185 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 CNN1P51911 297 aaKnown RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 NKX2-5P52952 324 aaPredicted RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 DEFB1P60022 68 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 ICAM4Q14773 271 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 FAM74A1Q5RGS3 127 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 AMTNQ6UX39 209 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 SSX7Q7RTT5 188 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 EXOC3-AS1Q8N2X6 119 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 OR4B1Q8NGF8 309 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 OR10J6PQ8NGY7 276 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 MAP1LC3BQ9GZQ8 125 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 Q9H3A6 140 aa7.27□□□□□ -1.25
VPS45-204ENST00000460366 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
VPS45-204ENST00000460366 TRAV1-1A0A0B4J248 108 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 A0A1W2PRE2 83 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 RBAKDNA6NC62 111 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 PGPA6NDG6 321 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 PRAC2D3DTV9 90 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 M0R3E3 92 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 CA1P00915 261 aaPredicted RBP7.26□□□□□ -1.25
VPS45-204ENST00000460366 SLC25A5P05141 298 aaKnown RBP7.26□□□□□ -1.25
VPS45-204ENST00000460366 FHITP49789 147 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 HIST1H1AQ02539 215 aaPredicted RBP7.26□□□□□ -1.25
VPS45-204ENST00000460366 FAM213BQ8TBF2 198 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 RNF183Q96D59 192 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
VPS45-204ENST00000460366 NKX6-2Q9C056 277 aaPredicted RBP7.26□□□□□ -1.25
VPS45-204ENST00000460366 ARL2-SNX15V9GYD0 113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms