RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ZFAND6Q6FIF0 208 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 OR10G4Q8NGN3 311 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 OR10G9Q8NGN4 311 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 OR10G7Q8NGN6 311 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 RNF141Q8WVD5 230 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 GNPNAT1Q96EK6 184 aaPredicted RBP15.81■□□□□ 0.12
SSNA1-202ENST00000459860 MRPL53Q96EL3 112 aaKnown RBP15.81■□□□□ 0.12
SSNA1-202ENST00000459860 RFNGQ9Y644 331 aa15.81■□□□□ 0.12
SSNA1-202ENST00000459860 ZNF705FA8MVS1 300 aaPredicted RBP15.8■□□□□ 0.12
SSNA1-202ENST00000459860 OR10J4P0C629 311 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 RAB2AP61019 212 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 SERF2P84101 59 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 FAM122CQ6P4D5 195 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 GOLT1BQ9Y3E0 138 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 HYDINQ4G0P3 5121 aa15.8■□□□□ 0.12
SSNA1-202ENST00000459860 BOLA2-SMG1P6H3BVE0 249 aa15.79■□□□□ 0.12
SSNA1-202ENST00000459860 JTBO76095 146 aa15.79■□□□□ 0.12
SSNA1-202ENST00000459860 AMTNQ6UX39 209 aa15.79■□□□□ 0.12
SSNA1-202ENST00000459860 NDUFB4O95168 129 aa15.78■□□□□ 0.12
SSNA1-202ENST00000459860 INSP01308 110 aa15.78■□□□□ 0.12
SSNA1-202ENST00000459860 CDC34P49427 236 aaPredicted RBP15.78■□□□□ 0.12
SSNA1-202ENST00000459860 SPINK13Q1W4C9 94 aa15.78■□□□□ 0.12
SSNA1-202ENST00000459860 FXYD5Q96DB9 178 aa15.78■□□□□ 0.12
SSNA1-202ENST00000459860 X6R8D5 127 aa15.78■□□□□ 0.12
SSNA1-202ENST00000459860 IGHV3OR16-12A0A075B7B8 117 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 IGHV4-28A0A0C4DH34 117 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 ZNF345Q14585 488 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 PQLC2Q6ZP29 291 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 Q8NAQ8 132 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 IGF2BP2-AS1Q96M15 143 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 TMEM208Q9BTX3 173 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 SH3BGRL3Q9H299 93 aa15.77■□□□□ 0.12
SSNA1-202ENST00000459860 HMSDA8MTL9 139 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 PRAC2D3DTV9 90 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 M0R2Z0 102 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 PRB4P10163 310 aaPredicted RBP15.76■□□□□ 0.11
SSNA1-202ENST00000459860 ICAM4Q14773 271 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 ZNF705AQ6ZN79 300 aaPredicted RBP15.76■□□□□ 0.11
SSNA1-202ENST00000459860 Q6ZNX1 250 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 EXOC3-AS1Q8N2X6 119 aa15.76■□□□□ 0.11
SSNA1-202ENST00000459860 M0R3E3 92 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 DEFB4AO15263 64 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 TSPOP30536 169 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 PHYHIPLQ96FC7 376 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 NEU1Q99519 415 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 ARPC5LQ9BPX5 153 aa15.75■□□□□ 0.11
SSNA1-202ENST00000459860 A0A0D9SG52 128 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 CXorf65A6NEN9 183 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 SMIM9A6NGZ8 99 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 CDKN1BP46527 198 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 LYPD1Q8N2G4 141 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 KCNRGQ8N5I3 272 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 C11orf45Q8TAV5 145 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 ZNF503Q96F45 646 aa15.74■□□□□ 0.11
SSNA1-202ENST00000459860 PLECQ15149 4684 aaKnown RBP15.73■□□□□ 0.11
SSNA1-202ENST00000459860 EIF3GO75821 320 aaKnown RBP eCLIP15.73■□□□□ 0.11
SSNA1-202ENST00000459860 CSN1S1P47710 185 aa15.73■□□□□ 0.11
SSNA1-202ENST00000459860 PMS2P11Q13670 270 aa15.73■□□□□ 0.11
SSNA1-202ENST00000459860 ACTR3CQ9C0K3 210 aaPredicted RBP15.73■□□□□ 0.11
SSNA1-202ENST00000459860 KANTRA0A1W2PQU2 76 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 NPIPB6E9PJ23 425 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 HMGB3O15347 200 aaKnown RBP15.72■□□□□ 0.11
SSNA1-202ENST00000459860 HBE1P02100 147 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 RANP62826 216 aaKnown RBP15.72■□□□□ 0.11
SSNA1-202ENST00000459860 FAM74A1Q5RGS3 127 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 AKR1C8PQ5T2L2 129 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 BAP18Q8IXM2 172 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 RPP25LQ8N5L8 163 aaKnown RBP15.72■□□□□ 0.11
SSNA1-202ENST00000459860 OR11H4Q8NGC9 324 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 Q9H3A6 140 aa15.72■□□□□ 0.11
SSNA1-202ENST00000459860 TRAV12-2A0A075B6T6 113 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 TMEM189A5PLL7 270 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 STAG3L2P0CL84 134 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 STAG3L3P0CL85 134 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 RBMY1A1P0DJD3 496 aaKnown RBP15.71■□□□□ 0.11
SSNA1-202ENST00000459860 RBMY1CP0DJD4 496 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 LEPP41159 167 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 RBMY1FQ15415 496 aaKnown RBP15.71■□□□□ 0.11
SSNA1-202ENST00000459860 C1orf158Q8N1D5 194 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 RAB24Q969Q5 203 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 ODF3Q96PU9 254 aa15.71■□□□□ 0.11
SSNA1-202ENST00000459860 CRXO43186 299 aaPredicted RBP15.7■□□□□ 0.1
SSNA1-202ENST00000459860 PFDN1O60925 122 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 ARL14EPLP0DKL9 152 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 RRN3P1Q2M238 152 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 TMEM78Q5T7P6 136 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 TMEM256Q8N2U0 113 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 CYTL1Q9NRR1 136 aa15.7■□□□□ 0.1
SSNA1-202ENST00000459860 hCG_2014768A0A024R1R8 64 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 NUPR2A6NF83 97 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 BCL2L11O43521 198 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 TCTE3Q8IZS6 198 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 CMTM2Q8TAZ6 248 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 RXFP4Q8TDU9 374 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 ST6GAL2Q96JF0 529 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 LINC00477Q96M19 166 aa15.69■□□□□ 0.1
SSNA1-202ENST00000459860 ZNF471Q9BX82 626 aaPredicted RBP15.69■□□□□ 0.1
SSNA1-202ENST00000459860 CXorf1O96002 111 aa15.68■□□□□ 0.1
SSNA1-202ENST00000459860 EIF5AP63241 154 aaKnown RBP15.68■□□□□ 0.1
SSNA1-202ENST00000459860 C20orf144Q9BQM9 153 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms