RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C11orf44Q8N8P7 122 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 EDN2P20800 178 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 BAGE2Q86Y30 109 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 ANAPC16Q96DE5 110 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 CYSRT1A8MQ03 144 aa18.53■□□□□ 0.56
U2AF1-204ENST00000459639 Q86TA4 180 aa18.53■□□□□ 0.56
U2AF1-204ENST00000459639 MRPL53Q96EL3 112 aaKnown RBP18.53■□□□□ 0.56
U2AF1-204ENST00000459639 NRN1Q9NPD7 142 aa18.53■□□□□ 0.56
U2AF1-204ENST00000459639 TRAV8-2A0A0B4J237 113 aa18.52■□□□□ 0.56
U2AF1-204ENST00000459639 CXorf65A6NEN9 183 aa18.52■□□□□ 0.56
U2AF1-204ENST00000459639 C2orf70A6NJV1 201 aa18.52■□□□□ 0.56
U2AF1-204ENST00000459639 LTAP01374 205 aa18.52■□□□□ 0.56
U2AF1-204ENST00000459639 IGLV2-11P01706 119 aa18.52■□□□□ 0.56
U2AF1-204ENST00000459639 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.52■□□□□ 0.56
U2AF1-204ENST00000459639 GCGP01275 180 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 HLA-DMBP28068 263 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 SRSF2Q01130 221 aaKnown RBP18.51■□□□□ 0.55
U2AF1-204ENST00000459639 FHL3Q13643 280 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 IGFL4Q6B9Z1 124 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 TCF24Q7RTU0 167 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 SFRP2Q96HF1 295 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 PEMTQ9UBM1 199 aa18.51■□□□□ 0.55
U2AF1-204ENST00000459639 A0A1B0GUS0 222 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 SOCS3O14543 225 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 PPP1R2P9O14990 202 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 CBLN1P23435 193 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 PSG3Q16557 428 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 HIST2H2BDQ6DRA6 164 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 LCN12Q6JVE5 192 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 RAX2Q96IS3 184 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 C16orf92Q96LL3 132 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 SGK494Q96LW2 274 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 DUX3Q96PT4 197 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 TRAV8-1A0A0A6YYK1 113 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 A0A1W2PRX2 142 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 FBLL1A6NHQ2 334 aaKnown RBP18.5■□□□□ 0.55
U2AF1-204ENST00000459639 H7BYZ3 331 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 M0QZ24 198 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 RPL11P62913 178 aaKnown RBP18.5■□□□□ 0.55
U2AF1-204ENST00000459639 FLI1Q01543 452 aaPredicted RBP18.5■□□□□ 0.55
U2AF1-204ENST00000459639 RNF182Q8N6D2 247 aa18.5■□□□□ 0.55
U2AF1-204ENST00000459639 SAMD13Q5VXD3 122 aa18.49■□□□□ 0.55
U2AF1-204ENST00000459639 C15orf54Q8N8G6 183 aa18.49■□□□□ 0.55
U2AF1-204ENST00000459639 MGST1P10620 155 aaKnown RBP18.48■□□□□ 0.55
U2AF1-204ENST00000459639 NHLRC2Q8NBF2 726 aa18.48■□□□□ 0.55
U2AF1-204ENST00000459639 OR9G4Q8NGQ1 327 aa18.48■□□□□ 0.55
U2AF1-204ENST00000459639 MLST8Q9BVC4 326 aa18.48■□□□□ 0.55
U2AF1-204ENST00000459639 PSG8Q9UQ74 426 aa18.48■□□□□ 0.55
U2AF1-204ENST00000459639 CCL24O00175 119 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 FOLR2P14207 255 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 OR5I1Q13606 314 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 OR10G8Q8NGN5 311 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 DLX4Q92988 240 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-204ENST00000459639 SETXQ7Z333 2677 aaKnown RBP18.47■□□□□ 0.55
U2AF1-204ENST00000459639 IGKV2-40A0A087WW87 121 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-204ENST00000459639 RBAKDNA6NC62 111 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 ZNF705FA8MVS1 300 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-204ENST00000459639 IGKV2D-40P01614 121 aaPredicted RBP18.47■□□□□ 0.55
U2AF1-204ENST00000459639 PRNTQ86SH4 94 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 MLXQ9UH92 298 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 ZFP30Q9Y2G7 519 aa18.47■□□□□ 0.55
U2AF1-204ENST00000459639 TMEM183AQ8IXX5 376 aa18.46■□□□□ 0.55
U2AF1-204ENST00000459639 BIN3Q9NQY0 253 aa18.46■□□□□ 0.55
U2AF1-204ENST00000459639 OSTCQ9NRP0 149 aa18.46■□□□□ 0.55
U2AF1-204ENST00000459639 ERVFC1-1P60608 527 aa18.45■□□□□ 0.54
U2AF1-204ENST00000459639 ADAMTSL5Q6ZMM2 481 aa18.45■□□□□ 0.54
U2AF1-204ENST00000459639 YPEL4Q96NS1 127 aa18.45■□□□□ 0.54
U2AF1-204ENST00000459639 FOXL1Q12952 345 aa18.44■□□□□ 0.54
U2AF1-204ENST00000459639 COLCA2A8K830 154 aa18.44■□□□□ 0.54
U2AF1-204ENST00000459639 ADARB2-AS1A8MUL3 147 aa18.44■□□□□ 0.54
U2AF1-204ENST00000459639 FAM231DQ6ZW35 169 aa18.44■□□□□ 0.54
U2AF1-204ENST00000459639 DCANP1Q8TF63 244 aa18.44■□□□□ 0.54
U2AF1-204ENST00000459639 IGKV3-7A0A075B6H7 116 aa18.43■□□□□ 0.54
U2AF1-204ENST00000459639 PRB4P10163 310 aaPredicted RBP18.43■□□□□ 0.54
U2AF1-204ENST00000459639 IBA57Q5T440 356 aaKnown RBP18.43■□□□□ 0.54
U2AF1-204ENST00000459639 C20orf173Q96LM9 149 aa18.43■□□□□ 0.54
U2AF1-204ENST00000459639 C2CD3Q4AC94 2353 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 PRAC2D3DTV9 90 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 KRTAP10-3P60369 221 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 ELOBQ15370 118 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 NDUFA11Q86Y39 141 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 FAM24BQ8N5W8 94 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 SELENOKQ9Y6D0 94 aa18.42■□□□□ 0.54
U2AF1-204ENST00000459639 CSN3P07498 182 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 ID1P41134 155 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 ZNF738Q8NE65 137 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 IMMP2LQ96T52 175 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 VGLL1Q99990 258 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 RNASE7Q9H1E1 156 aaKnown RBP18.41■□□□□ 0.54
U2AF1-204ENST00000459639 MS4A6AQ9H2W1 248 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 ZNF492Q9P255 531 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 URGCP-MRPS24S4R325 110 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 S100PP25815 95 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 PRR27Q6MZM9 219 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.41■□□□□ 0.54
U2AF1-204ENST00000459639 V9GYV3 84 aa18.41■□□□□ 0.54
U2AF1-204ENST00000459639 SAPCD1Q5SSQ6 148 aa18.4■□□□□ 0.54
U2AF1-204ENST00000459639 GBGT1Q8N5D6 347 aa18.4■□□□□ 0.54
U2AF1-204ENST00000459639 OVOL1O14753 267 aa18.39■□□□□ 0.53
U2AF1-204ENST00000459639 PFN1P07737 140 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms