RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 PCF11O94913 1555 aaKnown RBP-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 MYCBP2O75592 4640 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 BANF1O75531 89 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 IFNA4P05014 189 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 HSPE1P61604 102 aaKnown RBP-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 IFT20Q8IY31 132 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 PPTC7Q8NI37 304 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 ZHX1-C8orf76Q96EF9 292 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 CACYBPQ9HB71 228 aaKnown RBP-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 NSD1Q96L73 2696 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 CHD9Q3L8U1 2897 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 COL6A5A8TX70 2615 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 FRMPD1Q5SYB0 1578 aa-0.19□□□□□ -2.44
SCARNA18-201ENST00000459004 HRNRQ86YZ3 2850 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 DOPEY1Q5JWR5 2465 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 SETD2Q9BYW2 2564 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 CST2P09228 141 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 ARPP19P56211 112 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 C10orf111Q8N326 155 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 LIMD2Q9BT23 127 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 MAP1LC3BQ9GZQ8 125 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 CACNA1AO00555 2505 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 ZGRF1Q86YA3 2104 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 HECTD1Q9ULT8 2610 aa-0.2□□□□□ -2.44
SCARNA18-201ENST00000459004 PIK3C2AO00443 1686 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 A0A0J9YY99 117 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 DUXBA0A1W2PPF3 345 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 LYRM1O43325 122 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 C1QBP02746 253 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 PDE6GP18545 87 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 NCALDP61601 193 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 MIR22HGQ0VDD5 57 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 AKIRIN2Q53H80 203 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 C10orf99Q6UWK7 81 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 FOXI2Q6ZQN5 318 aa-0.21□□□□□ -2.44
SCARNA18-201ENST00000459004 N4BP2Q86UW6 1770 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 EP300Q09472 2414 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 PDZD2O15018 2839 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 ZFYVE26Q68DK2 2539 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 DOCK4Q8N1I0 1966 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 A6NN06 94 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 SERPINA1P01009 418 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 CXCL1P09341 107 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 IDO1P14902 403 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 TMBIM6P55061 237 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 CAV3P56539 151 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 ERVS71-1P61550 626 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 LYG2Q86SG7 212 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 C9orf16Q9BUW7 83 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 LPAR5Q9H1C0 372 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 ARL2BPQ9Y2Y0 163 aa-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 DSPP15924 2871 aaKnown RBP-0.22□□□□□ -2.44
SCARNA18-201ENST00000459004 LAMA3Q16787 3333 aa-0.22□□□□□ -2.45
SCARNA18-201ENST00000459004 CAMSAP2Q08AD1 1489 aa-0.22□□□□□ -2.45
SCARNA18-201ENST00000459004 TGP01266 2768 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 CAMSAP1Q5T5Y3 1602 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 FREM3P0C091 2139 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 TRAV5A0A0B4J249 113 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 ODAMA1E959 279 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 K7ERJ3 54 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 RER1O15258 196 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 HIST1H2BKO60814 126 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 NDUFC2O95298 119 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 LY6G6CO95867 125 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 IFNA14P01570 189 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 CD3DP04234 171 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 HIST1H2BJP06899 126 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 INSL3P51460 131 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 SPINK13Q1W4C9 94 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 SCGB2B2Q4G0G5 96 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 CASC2Q6XLA1 102 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 OR2J1Q9GZK6 312 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 CST11Q9H112 138 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 ARMC1Q9NVT9 282 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 CREBBPQ92793 2442 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 UHRF1BP1Q6BDS2 1440 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 BDP1A6H8Y1 2624 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 NBEAL1Q6ZS30 2694 aa-0.23□□□□□ -2.45
SCARNA18-201ENST00000459004 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 KDM6BO15054 1643 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 LAMA1P25391 3075 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 HIVEP3Q5T1R4 2406 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 APOBP04114 4563 aaKnown RBP-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 CHD6Q8TD26 2715 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 AIPO00170 330 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 TRGC2P03986 189 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 MT4P47944 62 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 PLECQ15149 4684 aaKnown RBP-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 ASB4Q9Y574 426 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 ADGRL3Q9HAR2 1447 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 NCOR2Q9Y618 2525 aa-0.24□□□□□ -2.45
SCARNA18-201ENST00000459004 SACSQ9NZJ4 4579 aa-0.25□□□□□ -2.45
SCARNA18-201ENST00000459004 LAMA5O15230 3695 aa-0.25□□□□□ -2.45
SCARNA18-201ENST00000459004 POLQO75417 2590 aa-0.25□□□□□ -2.45
SCARNA18-201ENST00000459004 ZNF292O60281 2723 aa-0.25□□□□□ -2.45
SCARNA18-201ENST00000459004 DNAH5Q8TE73 4624 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms