RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 U3KQK5 164 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
RFX3-211ENST00000458034 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 LOC400499M0QZD8 3231 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 ZFHX2Q9C0A1 2572 aaPredicted RBP8.51□□□□□ -1.05
RFX3-211ENST00000458034 TRBV7-1A0A0A6YYK4 115 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 CSN3P07498 182 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 GPR183P32249 361 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 RHOGP84095 191 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 AKAP13Q12802 2813 aa8.51□□□□□ -1.05
RFX3-211ENST00000458034 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 NPFFO15130 113 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 ATP6V0E1O15342 81 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 FOSL1P15407 271 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 SAA4P35542 130 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 Q71RC1 249 aaPredicted RBP8.5□□□□□ -1.05
RFX3-211ENST00000458034 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
RFX3-211ENST00000458034 ORAOV1Q8WV07 137 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 METTL26Q96S19 204 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 ASCL2Q99929 193 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 HIF1ANQ9NWT6 349 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 SMAD5-AS1Q9Y6J3 95 aa8.5□□□□□ -1.05
RFX3-211ENST00000458034 CENPVL3A0A0U1RRI6 287 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 D6R8Y8 96 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 PPBPP02775 128 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 IGLC6P0CF74 106 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 PRR31Q5SQ13 230 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 LINC00173Q6ZV60 143 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 DPF1Q92782 380 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 MOB4Q9Y3A3 225 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 ZFHX4Q86UP3 3567 aa8.49□□□□□ -1.05
RFX3-211ENST00000458034 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
RFX3-211ENST00000458034 FAM223BA6NKX1 122 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 BUB3O43684 328 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 ORM1P02763 201 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 HINT1P49773 126 aaPredicted RBP8.48□□□□□ -1.05
RFX3-211ENST00000458034 ZNF138P52744 262 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 LMO4P61968 165 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 HIST1H1AQ02539 215 aaPredicted RBP8.48□□□□□ -1.05
RFX3-211ENST00000458034 NHLH1Q02575 133 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 ATP5G2Q06055 141 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 TWIST1Q15672 202 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
RFX3-211ENST00000458034 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 FAM223AQ8IWN6 122 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 STPG4Q8N801 248 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 VGLL1Q99990 258 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 ZNF747Q9BV97 191 aa8.48□□□□□ -1.05
RFX3-211ENST00000458034 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
RFX3-211ENST00000458034 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 TMEM213A2RRL7 107 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 NDUFS7O75251 213 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 HBDP02042 147 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 CLEC3BP05452 202 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 CKS2P33552 79 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 TFPI2P48307 235 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 CRIP2P52943 208 aaPredicted RBP8.47□□□□□ -1.05
RFX3-211ENST00000458034 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 LGALS9CQ6DKI2 356 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 C12orf54Q6X4T0 127 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 C5orf56Q8N8D9 126 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 Q8TAT8 98 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 ITLN2Q8WWU7 325 aaPredicted RBP8.47□□□□□ -1.05
RFX3-211ENST00000458034 BPESC1Q9GZL8 116 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 NPFFR1Q9GZQ6 430 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 TIMM8BQ9Y5J9 83 aaPredicted RBP8.47□□□□□ -1.05
RFX3-211ENST00000458034 ABCA1O95477 2261 aa8.47□□□□□ -1.05
RFX3-211ENST00000458034 PTPRZ1P23471 2315 aaPredicted RBP8.46□□□□□ -1.05
RFX3-211ENST00000458034 A0A1W2PPR1 153 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.06
RFX3-211ENST00000458034 PSMG4Q5JS54 123 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 TMEM78Q5T7P6 136 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 OR1N2Q8NGR9 330 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 AJUBAQ96IF1 538 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 PIMREGQ9BSJ6 248 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 CNFNQ9BYD5 112 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 PRORYQ9H606 182 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 ABCA4P78363 2273 aa8.46□□□□□ -1.06
RFX3-211ENST00000458034 TRAV41A0A0B4J266 112 aa8.45□□□□□ -1.06
RFX3-211ENST00000458034 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
RFX3-211ENST00000458034 H0Y8G0 127 aa8.45□□□□□ -1.06
RFX3-211ENST00000458034 IGHG4P01861 327 aa8.45□□□□□ -1.06
RFX3-211ENST00000458034 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
RFX3-211ENST00000458034 ZNF80P51504 273 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms