RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SLC50A1Q9BRV3 221 aa9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 RSL24D1Q9UHA3 163 aaKnown RBP9.83□□□□□ -0.84
UPF3AP2-201ENST00000457924 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 PMS2P5A8MQ11 134 aa9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 DAZ2Q13117 558 aaKnown RBP9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 ARL6Q9H0F7 186 aa9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
UPF3AP2-201ENST00000457924 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 HOXB5P09067 269 aa9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 FAUP35544 74 aaKnown RBP9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 Q6ZTI0 123 aa9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 ARV1Q9H2C2 271 aa9.81□□□□□ -0.84
UPF3AP2-201ENST00000457924 TRAV12-3A0A0B4J271 114 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 J3KRW8 73 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 NXPH4O95158 308 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 SFT2D2O95562 160 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 LEPP41159 167 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 ICAM4Q14773 271 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 PATE2Q6UY27 113 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 PSENENQ9NZ42 101 aa9.8□□□□□ -0.84
UPF3AP2-201ENST00000457924 PRAC2D3DTV9 90 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 RRAS2P62070 204 aaPredicted RBP9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 SPCS2Q15005 226 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 KRTAP19-4Q3LI73 84 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 PXDC1Q5TGL8 231 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 LINC00305Q7Z4B0 112 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 BPIFA4PQ86YQ2 179 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 NPVFQ9HCQ7 196 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
UPF3AP2-201ENST00000457924 A0A087WTM6 91 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 K7EPK0 472 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 SMR3BP02814 79 aaPredicted RBP9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 TEPPQ6URK8 271 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 ODF3Q96PU9 254 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 MDFICQ9P1T7 246 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 PXMP4Q9Y6I8 212 aa9.78□□□□□ -0.84
UPF3AP2-201ENST00000457924 TRAV9-2A0A087WT02 112 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 FNDC10F2Z333 226 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 H3BTX0 84 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 SLC17A3O00476 420 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 GOSR2O14653 212 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 CT45A10P0DMU9 189 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 SLC38A11Q08AI6 406 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 PPP1R1AQ13522 171 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 SLC25A21Q9BQT8 299 aaPredicted RBP9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 CCDC59Q9P031 241 aaKnown RBP9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 MGAT4CQ9UBM8 478 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 FUT9Q9Y231 359 aa9.77□□□□□ -0.85
UPF3AP2-201ENST00000457924 LINC00854A0A1B0GVQ3 168 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 FABP12A6NFH5 140 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 SSSCA1O60232 199 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 ZNF324O75467 553 aaPredicted RBP9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 SMIM18P0DKX4 95 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 GCSHP23434 173 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 AP3S2P59780 193 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 ZNF546Q86UE3 836 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 TOMM5Q8N4H5 51 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 ZBTB8BQ8NAP8 495 aaPredicted RBP9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 C11orf72Q8NBR9 251 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 OR10P1Q8NGE3 313 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 FAT1Q14517 4588 aa9.76□□□□□ -0.85
UPF3AP2-201ENST00000457924 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 COX7A2P2O60397 106 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 CCNKO75909 580 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 METTL15P1P0C7V9 234 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 C4orf46Q504U0 113 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 LYPD5Q6UWN5 251 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 Q6ZSN1 163 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 MCFD2Q8NI22 146 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 SMIM8Q96KF7 97 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 LY96Q9Y6Y9 160 aa9.75□□□□□ -0.85
UPF3AP2-201ENST00000457924 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 C7orf71A4D174 169 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 AGPAT2O15120 278 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 SPINK4O60575 86 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 IGLC2P0DOY2 106 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 TNFSF8P32971 234 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 C10orf113Q5VZT2 155 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 TMEM14EPQ6UXP3 125 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 DYNC2LI1Q8TCX1 351 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 SAT2Q96F10 170 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 ST6GAL2Q96JF0 529 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 SOSTQ9BQB4 213 aa9.74□□□□□ -0.85
UPF3AP2-201ENST00000457924 MSRB1Q9NZV6 116 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms