RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZBTB34Q8NCN2 500 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 OBP2AQ9NY56 170 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 C11orf21Q9P2W6 132 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 EPDR1Q9UM22 224 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 SERTM2A0A1B0GWG4 89 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 A6NJY4 79 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 TNFSF15O95150 251 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 CT45A6P0DMU7 189 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 CT45A5P0DMU8 189 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 CT45A7P0DMV0 189 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 EFNA4P52798 201 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 RPL32P62910 135 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 OR1C1Q15619 314 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 C6orf15Q6UXA7 325 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 BPIFA4PQ86YQ2 179 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 KLF14Q8TD94 323 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 BOKQ9UMX3 212 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 S4R3C0 116 aa3.55□□□□□ -1.84
DEPDC1-202ENST00000456315 NPIPB5A8MRT5 1133 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 LYZL6O75951 148 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 LIPFP07098 398 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 SSR4P51571 173 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 CFAP126Q5VTH2 177 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 Q6ZS46 218 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 ZMAT4Q9H898 229 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 DNAH7Q8WXX0 4024 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 TEX50A0A1B0GTY4 177 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 PATE3B3GLJ2 98 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 HCP5Q6MZN7 132 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 COL27A1Q8IZC6 1860 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 FLYWCH2Q96CP2 140 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 SH3BGRL2Q9UJC5 107 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 TRBV7-3A0A075B6L6 115 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHV1-45A0A0A0MS14 117 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 TCRAP04437 139 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 KLF17Q5JT82 389 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF580Q9UK33 172 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 TRBV7-9A0A0J9YWB2 115 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 A0A1W2PPI3 338 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 CCL3L1P16619 93 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 CNTFRP26992 372 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 C1QTNF4Q9BXJ3 329 aa3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-202ENST00000456315 C2CD4DB7Z1M9 353 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 TGFAP01135 160 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 PPP1R35Q8TAP8 253 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 Q8TAT8 98 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 PKIBQ9C010 78 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 CYSLTR1Q9Y271 337 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 RAXQ9Y2V3 346 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 IGLV2-18A0A075B6J9 118 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 SAA1P0DJI8 122 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 ORM2P19652 201 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 PRTN3P24158 256 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 DEFB1P60022 68 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 CEMP1Q6PRD7 247 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 GOLT1AQ6ZVE7 132 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 SRSF12Q8WXF0 261 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF492Q9P255 531 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 GNG12Q9UBI6 72 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHV3-72A0A0B4J1Y9 119 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 MRPL33O75394 65 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 ID1P41134 155 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 CSN1S1P47710 185 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 FOXI1Q12951 378 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 C12orf74Q32Q52 190 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 LINC00305Q7Z4B0 112 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 PLEKHB2Q96CS7 222 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 MS4A6AQ9H2W1 248 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 TRAV40A0A0B4J280 105 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 A1L4Q6 167 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 MRPL51Q4U2R6 128 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 Q6ZSV7 163 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 RPRMLQ8N4K4 120 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 FAM216BQ8N7L0 139 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 DEFB108BQ8NET1 73 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 C8orf49Q96NF6 230 aa3.53□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 EVI2AP22794 236 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 RBPMS2Q6ZRY4 209 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 SLC25A10Q9UBX3 287 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 A0A087WX48 190 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 C19orf67A6NJJ6 358 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 EGR2P11161 476 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 ATP1A1-AS1Q5TC04 95 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 PLXDC1Q8IUK5 500 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 NDUFA4L2Q9NRX3 87 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 PRNDQ9UKY0 176 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 KLRC4-KLRK1H3BQV0 150 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 MRPS12O15235 138 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 SPINK8P0C7L1 97 aa3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 SRSF9Q13242 221 aaKnown RBP eCLIP3.52□□□□□ -1.85
DEPDC1-202ENST00000456315 CHAC1Q9BUX1 264 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms