RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 Q96MF0 132 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 VGLL1Q99990 258 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 APCSP02743 223 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 KRTDAPP60985 99 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
GTF2IRD1-203ENST00000455841 YPEL3P61236 119 aaPredicted RBP11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 AGRNO00468 2067 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 NDUFS8O00217 210 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 ORM1P02763 201 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 PLP1P60201 277 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 UNQ9165/PRO28630Q6UXU0 137 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
GTF2IRD1-203ENST00000455841 CHEK1O14757 476 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 AMTP48728 403 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 METTL26Q96S19 204 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 PAX1P15863 534 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 MYCNOSP40205 109 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 RCHY1Q96PM5 261 aa11.83□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 WI2-2373I1.2A0A1W2PRP0 233 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 SPRY2O43597 315 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 ZNF138P52744 262 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 A8MWL6 223 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TYMSP04818 313 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 EDN2P20800 178 aa11.82□□□□□ -0.52
GTF2IRD1-203ENST00000455841 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 GRAMD2BQ96HH9 432 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 SPOCK3Q9BQ16 436 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 S100A7AQ86SG5 101 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 GDF5OSQ5U4N7 250 aa11.81□□□□□ -0.52
GTF2IRD1-203ENST00000455841 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 NACAE9PAV3 2078 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 PSG3Q16557 428 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 LCN12Q6JVE5 192 aa11.8□□□□□ -0.52
GTF2IRD1-203ENST00000455841 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 ATOH7Q8N100 152 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 LTAP01374 205 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 S100A12P80511 92 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
GTF2IRD1-203ENST00000455841 SMIM27A0A1W2PRY6 76 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 SIGLECL1Q8N7X8 197 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 F6UB75 175 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 ZNF738Q8NE65 137 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 LOC389332A0A1B0GUA5 103 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 HSBP1O75506 76 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 IGLV2-11P01706 119 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 Q6ZQT7 251 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 WFDC11Q8NEX6 87 aa11.78□□□□□ -0.52
GTF2IRD1-203ENST00000455841 HOXA3O43365 443 aaPredicted RBP11.77□□□□□ -0.52
GTF2IRD1-203ENST00000455841 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.52
GTF2IRD1-203ENST00000455841 BUB3O43684 328 aa11.77□□□□□ -0.53
GTF2IRD1-203ENST00000455841 HLA-DQA1P01909 254 aa11.77□□□□□ -0.53
GTF2IRD1-203ENST00000455841 SLC25A16P16260 332 aa11.77□□□□□ -0.53
GTF2IRD1-203ENST00000455841 RNF24Q9Y225 148 aa11.77□□□□□ -0.53
GTF2IRD1-203ENST00000455841 TMEM189A5PLL7 270 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 FXYD7P58549 80 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 DEFB136Q30KP8 78 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 MLST8Q9BVC4 326 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 ZNF469Q96JG9 3925 aaPredicted RBP11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 SH2D1AO60880 128 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 CRIP1P50238 77 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 HBBP68871 147 aa11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 MCRIP2Q9BUT9 160 aaKnown RBP11.76□□□□□ -0.53
GTF2IRD1-203ENST00000455841 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 PSG9Q00887 426 aa11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 KLF12Q9Y4X4 402 aa11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 A6NDX4 124 aa11.75□□□□□ -0.53
GTF2IRD1-203ENST00000455841 MRPS12O15235 138 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms