RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZNF431Q8TF32 576 aaPredicted RBP11.12□□□□□ -0.63
GPC1-206ENST00000455111 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
GPC1-206ENST00000455111 LSM5Q9Y4Y9 91 aaKnown RBP11.12□□□□□ -0.63
GPC1-206ENST00000455111 IGSF23A1L1A6 192 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 NPIPB6E9PJ23 425 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 J3KRW8 73 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 COX7A2P2O60397 106 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 NDUFB4O95168 129 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
GPC1-206ENST00000455111 TRAV6A0A075B6T7 132 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 TRAV26-1A0A087WT03 109 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 A0A0J9YY99 117 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 M0R3E3 92 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 LYRM1O43325 122 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 TCRBP04435 133 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 CAMLGP49069 296 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 ESRGQ1W209 222 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 SOHLH1Q5JUK2 328 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 Q6ZQT7 251 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 C20orf144Q9BQM9 153 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
GPC1-206ENST00000455111 TRAV12-3A0A0B4J271 114 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 GAGE7O76087 117 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 ERCC8Q13216 396 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
GPC1-206ENST00000455111 CENPXA8MT69 81 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 PRR9Q5T870 116 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 Q6ZTI0 123 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 RXFP4Q8TDU9 374 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
GPC1-206ENST00000455111 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 C16orf90A8MZG2 172 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 ZNF324O75467 553 aaPredicted RBP11.07□□□□□ -0.64
GPC1-206ENST00000455111 PYYP10082 97 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 CAV2P51636 162 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 CCL18P55774 89 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 CD300CQ08708 224 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 OR5I1Q13606 314 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 RAB32Q13637 225 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 TMEM252Q8N6L7 170 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 Q9H8V8 135 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
GPC1-206ENST00000455111 NUDT15Q9NV35 164 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 PXMP4Q9Y6I8 212 aa11.07□□□□□ -0.64
GPC1-206ENST00000455111 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 KLLNB2CW77 178 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 L7N2F9 121 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
GPC1-206ENST00000455111 BCAP31P51572 246 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 VAMP2P63027 116 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 BTN1A1Q13410 526 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 C12orf45Q8N5I9 185 aaPredicted RBP11.06□□□□□ -0.64
GPC1-206ENST00000455111 CHAC2Q8WUX2 184 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 GNPNAT1Q96EK6 184 aaPredicted RBP11.06□□□□□ -0.64
GPC1-206ENST00000455111 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 AGPAT4-IT1Q9H0P7 198 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 SLC39A9Q9NUM3 307 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 UQCC1Q9NVA1 299 aa11.06□□□□□ -0.64
GPC1-206ENST00000455111 ZNF253O75346 499 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 CDK2AP2O75956 126 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 M6PRP20645 277 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 SULT1A1P50225 295 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 CNPY1Q3B7I2 92 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 S100A7AQ86SG5 101 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 ZNF503Q96F45 646 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
GPC1-206ENST00000455111 A0A096LPF7 62 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 C5orf51A6NDU8 294 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 DAZ2Q13117 558 aaKnown RBP11.04□□□□□ -0.64
GPC1-206ENST00000455111 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 Q9H3A6 140 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 GSN-AS1Q9NRJ2 163 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 KLF12Q9Y4X4 402 aa11.04□□□□□ -0.64
GPC1-206ENST00000455111 RLN2P04090 185 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 LEPP41159 167 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 CLINT1Q14677 625 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 ZNF846Q147U1 533 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 GUK1Q16774 197 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 Q6ZRG5 221 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms