RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
LAMA4-209ENST00000453937 LRRC20Q8TCA0 184 aa10.72□□□□□ -0.69
LAMA4-209ENST00000453937 Q9H3A6 140 aa10.72□□□□□ -0.69
LAMA4-209ENST00000453937 SRD5A3Q9H8P0 318 aa10.72□□□□□ -0.69
LAMA4-209ENST00000453937 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 HLA-DRB4P13762 266 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 IFITM2Q01629 132 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 ICAM4Q14773 271 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
LAMA4-209ENST00000453937 RPUSD4Q96CM3 377 aaKnown RBP10.71□□□□□ -0.69
LAMA4-209ENST00000453937 CLUHP3Q96NS8 147 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 OTORQ9NRC9 128 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 PRELID1Q9Y255 219 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.69
LAMA4-209ENST00000453937 HLA-DRB4X5D2U9 266 aa10.71□□□□□ -0.69
LAMA4-209ENST00000453937 A0A1W2PRE2 83 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 FAM74A7A6NL05 159 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 ZNF705EA8MWA4 302 aaPredicted RBP10.7□□□□□ -0.7
LAMA4-209ENST00000453937 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
LAMA4-209ENST00000453937 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 ARL6IP6Q8N6S5 226 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 ZNF738Q8NE65 137 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
LAMA4-209ENST00000453937 PGPA6NDG6 321 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
LAMA4-209ENST00000453937 FRMD6-AS1P0C7T7 363 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 ZNF705DP0CH99 300 aaPredicted RBP10.69□□□□□ -0.7
LAMA4-209ENST00000453937 ZNF705BP0CI00 300 aaPredicted RBP10.69□□□□□ -0.7
LAMA4-209ENST00000453937 ACTL10Q5JWF8 245 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 CCDC28AQ8IWP9 274 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 MRAPQ8TCY5 172 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 ARL2-SNX15V9GYD0 113 aa10.69□□□□□ -0.7
LAMA4-209ENST00000453937 A0A1B0GV50 99 aa10.68□□□□□ -0.7
LAMA4-209ENST00000453937 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
LAMA4-209ENST00000453937 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
LAMA4-209ENST00000453937 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 IFNA7P01567 189 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 HBE1P02100 147 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
LAMA4-209ENST00000453937 SUMO1P63165 101 aaKnown RBP10.67□□□□□ -0.7
LAMA4-209ENST00000453937 IQCF2Q8IXL9 164 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 TUBA4BQ9H853 241 aa10.67□□□□□ -0.7
LAMA4-209ENST00000453937 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
LAMA4-209ENST00000453937 KIR2DL5BA0A0G2JN68 375 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 KIR2DL5BA0A0G2JPC4 375 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 PAGE4O60829 102 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 NMBP08949 121 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 UBE2G2P60604 165 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 HAGHQ16775 308 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 EBLN2Q6P2I7 272 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 STHQ8IWL8 128 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 KIR2DL5AQ8N109 375 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 KIR2DL5BQ8NHK3 375 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
LAMA4-209ENST00000453937 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
LAMA4-209ENST00000453937 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 DUSP14O95147 198 aaKnown RBP10.65□□□□□ -0.7
LAMA4-209ENST00000453937 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
LAMA4-209ENST00000453937 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
LAMA4-209ENST00000453937 ATP5G3P48201 142 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 PPT1P50897 306 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 GNG5P63218 68 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 RXFP4Q8TDU9 374 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 VGLL1Q99990 258 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
LAMA4-209ENST00000453937 EPDR1Q9UM22 224 aa10.65□□□□□ -0.7
LAMA4-209ENST00000453937 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 TCRAP04437 139 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 SLC25A5P05141 298 aaKnown RBP10.64□□□□□ -0.71
LAMA4-209ENST00000453937 CT45A10P0DMU9 189 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 HIST1H1AQ02539 215 aaPredicted RBP10.64□□□□□ -0.71
LAMA4-209ENST00000453937 ERCC8Q13216 396 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 PCNPQ8WW12 178 aaKnown RBP10.64□□□□□ -0.71
LAMA4-209ENST00000453937 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 SLC35B3Q9H1N7 401 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 MANBALQ9NQG1 85 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
LAMA4-209ENST00000453937 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 LINC00477Q96M19 166 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 ODF3Q96PU9 254 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 CSTL1Q9H114 145 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
LAMA4-209ENST00000453937 CRXO43186 299 aaPredicted RBP10.62□□□□□ -0.71
LAMA4-209ENST00000453937 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
LAMA4-209ENST00000453937 CSN1S1P47710 185 aa10.62□□□□□ -0.71
LAMA4-209ENST00000453937 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
LAMA4-209ENST00000453937 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
LAMA4-209ENST00000453937 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
LAMA4-209ENST00000453937 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms