RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 NIPSNAP3BQ9BS92 247 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 ATG101Q9BSB4 218 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 MLXQ9UH92 298 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 SELENOKQ9Y6D0 94 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 TRBV6-1A0A0K0K1D8 114 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 ZNF705FA8MVS1 300 aaPredicted RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 PRAC2D3DTV9 90 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 K7EN84 100 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 M0R036 132 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 DNASE2O00115 360 aaPredicted RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 PRB4P10163 310 aaPredicted RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 AKR1C3P42330 323 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 CNN1P51911 297 aaKnown RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 PSG3Q16557 428 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 CENPWQ5EE01 88 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 LCN12Q6JVE5 192 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 GOLT1AQ6ZVE7 132 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 NDUFA11Q86Y39 141 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 RNF182Q8N6D2 247 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 CMTM2Q8TAZ6 248 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 DCANP1Q8TF63 244 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 ISOC2Q96AB3 205 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 MRPL53Q96EL3 112 aaKnown RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 C20orf173Q96LM9 149 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 SGK494Q96LW2 274 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 MLST8Q9BVC4 326 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 AAMDCQ9H7C9 122 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 NRN1Q9NPD7 142 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 AURKAIP1Q9NWT8 199 aaPredicted RBP4.52□□□□□ -1.69
SDC4P-201ENST00000453285 RPH3ALQ9UNE2 315 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 PRELID1Q9Y255 219 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 LY96Q9Y6Y9 160 aa4.52□□□□□ -1.69
SDC4P-201ENST00000453285 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 A0A087WWC5 75 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 TRAV8-1A0A0A6YYK1 113 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 B4DEV8 164 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 K7EQG2 157 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 OVOL1O14753 267 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 TSPAN4O14817 238 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 GCGP01275 180 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 LTAP01374 205 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 S100A9P06702 114 aaKnown RBP4.51□□□□□ -1.69
SDC4P-201ENST00000453285 BMI1P35226 326 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 GNG4P50150 75 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 RHEBQ15382 184 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 ADIRFQ15847 76 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 DEFB114Q30KQ6 69 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 NSUN5P1Q3KNT7 163 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 BAGE2Q86Y30 109 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 TMEM75Q8N9X5 138 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 FMC1Q96HJ9 113 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 C16orf92Q96LL3 132 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 CITED1Q99966 193 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 KRTAP17-1Q9BYP8 105 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 MS4A6AQ9H2W1 248 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 SIGLEC8Q9NYZ4 499 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 PSG8Q9UQ74 426 aa4.51□□□□□ -1.69
SDC4P-201ENST00000453285 IGKV3-7A0A075B6H7 116 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 IGKV2-40A0A087WW87 121 aaPredicted RBP4.5□□□□□ -1.69
SDC4P-201ENST00000453285 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 RBAKDNA6NC62 111 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 IGKV2D-40P01614 121 aaPredicted RBP4.5□□□□□ -1.69
SDC4P-201ENST00000453285 CSN1S1P47710 185 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 UBE2G1P62253 170 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
SDC4P-201ENST00000453285 FLI1Q01543 452 aaPredicted RBP4.5□□□□□ -1.69
SDC4P-201ENST00000453285 ERCC8Q13216 396 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 BTN1A1Q13410 526 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 OR5I1Q13606 314 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 RNF212Q495C1 297 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
SDC4P-201ENST00000453285 COX8CQ7Z4L0 72 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 PRNTQ86SH4 94 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 Q86TA4 180 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 CBLN2Q8IUK8 224 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 TMEM183AQ8IXX5 376 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 GBGT1Q8N5D6 347 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 FAM24BQ8N5W8 94 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 YPEL4Q96NS1 127 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 ASCL2Q99929 193 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 VGLL1Q99990 258 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 TUBA4BQ9H853 241 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 TMEM242Q9NWH2 141 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 DNHD1Q96M86 4753 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 VWFP04275 2813 aa4.5□□□□□ -1.69
SDC4P-201ENST00000453285 FBN1P35555 2871 aaKnown RBP4.49□□□□□ -1.69
SDC4P-201ENST00000453285 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
SDC4P-201ENST00000453285 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
SDC4P-201ENST00000453285 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
SDC4P-201ENST00000453285 IZUMO1RA6ND01 250 aa4.49□□□□□ -1.69
SDC4P-201ENST00000453285 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
SDC4P-201ENST00000453285 K7EQM0 130 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms