RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 AGRNO00468 2067 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 DYSFO75923 2080 aa6.83□□□□□ -1.32
LSM5-208ENST00000450169 SCGB2A1O75556 95 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 LEPP41159 167 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 OBP2BQ9NPH6 170 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 TMEM160Q9NX00 188 aa6.82□□□□□ -1.32
LSM5-208ENST00000450169 IGHV1-45A0A0A0MS14 117 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 TRAV40A0A0B4J280 105 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 IGHV1OR15-9A0A0B4J2B8 117 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 NCBP2LA6PVI3 153 aaKnown RBP6.81□□□□□ -1.32
LSM5-208ENST00000450169 A8MWV9 139 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 LINC01619G3V211 115 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 ATP5LO75964 103 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 ERHP84090 104 aaKnown RBP6.81□□□□□ -1.32
LSM5-208ENST00000450169 TBC1D28Q2M2D7 210 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 FAM159AQ6UWV7 190 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 THAP8Q8NA92 274 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 RAB1BQ9H0U4 201 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 OTORQ9NRC9 128 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 TRAV4A0A0B4J268 109 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 A0A1W2PR77 199 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 IQCF6A8MYZ5 107 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 FCN3O75636 299 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 UTF1Q5T230 341 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 SFTA2Q6UW10 78 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 LYZL1Q6UWQ5 148 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 ZFP2Q6ZN57 461 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 MDP1Q86V88 176 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 CD177Q8N6Q3 437 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 IMMP1LQ96LU5 166 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 RAB9BQ9NP90 201 aa6.81□□□□□ -1.32
LSM5-208ENST00000450169 TMSB15BA0A087X1C1 80 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 MYMXA0A1B0GTQ4 84 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 LINC01549A6NIU2 74 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 IGKV1-16P04430 117 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 ASIPP42127 132 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 UBE2D3P61077 147 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 UBE2D2P62837 147 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 PPP1R27Q86WC6 154 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 PPDPFQ9H3Y8 114 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 TNCP24821 2201 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 H3BVH4 76 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 M0QXV9 152 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 IGHG4P01861 327 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 SAA1P0DJI8 122 aaPredicted RBP6.8□□□□□ -1.32
LSM5-208ENST00000450169 COX6A1P12074 109 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 Q6Q795 121 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 SBSPONQ8IVN8 264 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 ZCCHC24Q8N2G6 241 aaKnown RBP6.8□□□□□ -1.32
LSM5-208ENST00000450169 EXOC3-AS1Q8N2X6 119 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 NDUFA4L2Q9NRX3 87 aa6.8□□□□□ -1.32
LSM5-208ENST00000450169 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
LSM5-208ENST00000450169 MRPL36Q9P0J6 103 aaKnown RBP6.8□□□□□ -1.32
LSM5-208ENST00000450169 CRLF1O75462 422 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 PRDX2P32119 198 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 CRIP1P50238 77 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 MEIG1Q5JSS6 88 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 ASCL2Q99929 193 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 RASL11BQ9BPW5 248 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 CALYQ9NYX4 217 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 ATP5J2P56134 94 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 TMEM75Q8N9X5 138 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 SPRY4Q9C004 299 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 CACNA1EQ15878 2313 aa6.79□□□□□ -1.32
LSM5-208ENST00000450169 TRAV8-2A0A0B4J237 113 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 TCL1BO95988 128 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.322e-7■■■■□ 24.9
LSM5-208ENST00000450169 PRR30Q53SZ7 412 aaPredicted RBP6.78□□□□□ -1.32
LSM5-208ENST00000450169 SPXQ9BT56 116 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 SLC25A39Q9BZJ4 359 aaPredicted RBP6.78□□□□□ -1.32
LSM5-208ENST00000450169 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
LSM5-208ENST00000450169 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 PLNP26678 52 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 UBE2D1P51668 147 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 WT1-ASQ06250 92 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 TRGV9Q99603 122 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 TMEM126AQ9H061 195 aa6.78□□□□□ -1.32
LSM5-208ENST00000450169 ZNF71Q9NQZ8 489 aaPredicted RBP6.78□□□□□ -1.32
LSM5-208ENST00000450169 E7EUB6 86 aa6.77□□□□□ -1.33
LSM5-208ENST00000450169 KLF14Q8TD94 323 aaPredicted RBP6.77□□□□□ -1.33
LSM5-208ENST00000450169 PROCRQ9UNN8 238 aa6.77□□□□□ -1.33
LSM5-208ENST00000450169 PI4KAP42356 2102 aa6.77□□□□□ -1.33
LSM5-208ENST00000450169 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 NDUFA3O95167 84 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 TNFRSF6BO95407 300 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 TNFRSF1AP19438 455 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 NXPH1P58417 271 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 OR10J6PQ8NGY7 276 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms