RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TRGC1P0CF51 173 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 SCGB2A2Q13296 93 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 FOXE3Q13461 319 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 ACTL10Q5JWF8 245 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 PRNTQ86SH4 94 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 KLK15Q9H2R5 256 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 PEF1Q9UBV8 284 aaKnown RBP8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 SMAD5-AS1Q9Y6J3 95 aa8.13□□□□□ -1.11
VIPAS39-203ENST00000448935 MYO9AB2RTY4 2548 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 IGHV3OR16-8A0A075B7F1 116 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 A8MWL6 223 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 CD5LO43866 347 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 IGLV2-11P01706 119 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 P01737 135 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 IGHV3-11P01762 117 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 MT-ND6P03923 174 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 BMI1P35226 326 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 FABP9Q0Z7S8 132 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 FAM106AQ4KMX7 169 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 C16orf54Q6UWD8 224 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 FRZBQ92765 325 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 MRPL53Q96EL3 112 aaKnown RBP8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 SGK494Q96LW2 274 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 RPP21Q9H633 154 aaKnown RBP8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 ZNF702PQ9H963 129 aa8.12□□□□□ -1.11
VIPAS39-203ENST00000448935 IZUMO1RA6ND01 250 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 K7EMT4 169 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 M0R3E3 92 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 PHOX2AO14813 284 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 CT45A10P0DMU9 189 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 NDUFA6P56556 154 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 RASL11AQ6T310 242 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 Q8N2B8 174 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 CIARTQ8N365 385 aaPredicted RBP8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 NAT8BQ9UHF3 227 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 CREBBPQ92793 2442 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 RBAKDNA6NC62 111 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 CHEK1O14757 476 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 GPHB5Q86YW7 130 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 SIGLECL1Q8N7X8 197 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 GFRA4Q9GZZ7 299 aa8.11□□□□□ -1.11
VIPAS39-203ENST00000448935 CSPG4Q6UVK1 2322 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 NPIPB6E9PJ23 425 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 ZNF207O43670 478 aaKnown RBP8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 TRBV12-3P01733 135 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 S100A8P05109 93 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 HOXA5P20719 270 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 AKR1D1P51857 326 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 SAMD13Q5VXD3 122 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 UFC1Q9Y3C8 167 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
VIPAS39-203ENST00000448935 POLQO75417 2590 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 IGHV3-66A0A0C4DH42 116 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 APOHP02749 345 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 CDX1P47902 265 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 KIR3DS1Q14943 382 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 COX8CQ7Z4L0 72 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 RNF152Q8N8N0 203 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
VIPAS39-203ENST00000448935 IGHV7-4-1A0A0J9YVY3 117 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 SNURFLB1AK76 121 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 HLA-DQA1P01909 254 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 LGALS1P09382 135 aaKnown RBP8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 TCL1AP56279 114 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 UNQ9165/PRO28630Q6UXU0 137 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 WIPF2Q8TF74 440 aaPredicted RBP8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 YAE1D1Q9NRH1 226 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 APCP25054 2843 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 ABCA12Q86UK0 2595 aa8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 TEP1Q99973 2627 aaKnown RBP8.08□□□□□ -1.12
VIPAS39-203ENST00000448935 IGHV3OR16-13A0A075B7E8 117 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 IGHV3-49A0A0A0MS15 119 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms