RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SDF2L1Q9HCN8 221 aa18.77■□□□□ 0.6
RFFL-206ENST00000447669 PRAC2D3DTV9 90 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 NDUFS6O75380 124 aaKnown RBP18.76■□□□□ 0.59
RFFL-206ENST00000447669 TMEM241Q24JQ0 296 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 ATG101Q9BSB4 218 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 NRN1Q9NPD7 142 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 HIST1H2BAQ96A08 127 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 PEMTQ9UBM1 199 aa18.76■□□□□ 0.59
RFFL-206ENST00000447669 IGKV2-40A0A087WW87 121 aaPredicted RBP18.75■□□□□ 0.59
RFFL-206ENST00000447669 DIRC3C9JPN6 131 aa18.75■□□□□ 0.59
RFFL-206ENST00000447669 SOCS3O14543 225 aa18.75■□□□□ 0.59
RFFL-206ENST00000447669 IGKV2D-40P01614 121 aaPredicted RBP18.75■□□□□ 0.59
RFFL-206ENST00000447669 CENPWQ5EE01 88 aa18.75■□□□□ 0.59
RFFL-206ENST00000447669 TVP23CQ96ET8 276 aa18.75■□□□□ 0.59
RFFL-206ENST00000447669 TRRAPQ9Y4A5 3859 aa18.75■□□□□ 0.59
RFFL-206ENST00000447669 ZNF253O75346 499 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 RPL23P62829 140 aaKnown RBP18.74■□□□□ 0.59
RFFL-206ENST00000447669 ADIRFQ15847 76 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 OCC1Q8TAD7 63 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 MS4A6AQ9H2W1 248 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 NAT8Q9UHE5 227 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 OVOL1O14753 267 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 LCN12Q6JVE5 192 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 FAM24BQ8N5W8 94 aa18.74■□□□□ 0.59
RFFL-206ENST00000447669 CNN1P51911 297 aaKnown RBP18.73■□□□□ 0.59
RFFL-206ENST00000447669 CITED1Q99966 193 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 SLC50A1Q9BRV3 221 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 SNAPINO95295 136 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 IGLV2-11P01706 119 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 FAM74A3Q4VXF1 159 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 SPATA3Q8NHX4 192 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 DCANP1Q8TF63 244 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 IGF2BP2-AS1Q96M15 143 aa18.73■□□□□ 0.59
RFFL-206ENST00000447669 ZNF705DP0CH99 300 aaPredicted RBP18.72■□□□□ 0.59
RFFL-206ENST00000447669 ZNF705BP0CI00 300 aaPredicted RBP18.72■□□□□ 0.59
RFFL-206ENST00000447669 LINC01551Q86U37 167 aa18.72■□□□□ 0.59
RFFL-206ENST00000447669 K7EN84 100 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 M0QZ24 198 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 GNG4P50150 75 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 VGLL1Q99990 258 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 C7orf77A4D0Y5 90 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 BMI1P35226 326 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 ERCC8Q13216 396 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 OR5I1Q13606 314 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 RPS10P5Q9NQ39 176 aa18.71■□□□□ 0.59
RFFL-206ENST00000447669 IGLV2-8P01709 118 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 CSN1S1P47710 185 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 UBE2G1P62253 170 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 TMEM183BQ1AE95 376 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 PRNTQ86SH4 94 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 KLF12Q9Y4X4 402 aa18.7■□□□□ 0.58
RFFL-206ENST00000447669 TSPAN4O14817 238 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 TMEM61Q8N0U2 210 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 DYNLRB2Q8TF09 96 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 TCEAL7Q9BRU2 100 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 IZUMO1RA6ND01 250 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 PSG3Q16557 428 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 CD300EQ496F6 205 aaPredicted RBP18.69■□□□□ 0.58
RFFL-206ENST00000447669 TMEM88Q6PEY1 159 aa18.69■□□□□ 0.58
RFFL-206ENST00000447669 STAB1Q9NY15 2570 aa18.68■□□□□ 0.58
RFFL-206ENST00000447669 DNASE2O00115 360 aaPredicted RBP18.68■□□□□ 0.58
RFFL-206ENST00000447669 PF4P02776 101 aa18.68■□□□□ 0.58
RFFL-206ENST00000447669 MEOX2P50222 304 aa18.68■□□□□ 0.58
RFFL-206ENST00000447669 DEFB114Q30KQ6 69 aa18.68■□□□□ 0.58
RFFL-206ENST00000447669 BAGE2Q86Y30 109 aa18.68■□□□□ 0.58
RFFL-206ENST00000447669 C9JCJ5 164 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 F6UB75 175 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 ZNF738Q8NE65 137 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 Q8TAT8 98 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 ZNF688P0C7X2 276 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 FMC1Q96HJ9 113 aa18.67■□□□□ 0.58
RFFL-206ENST00000447669 MGST1P10620 155 aaKnown RBP18.66■□□□□ 0.58
RFFL-206ENST00000447669 TAS2R60P59551 318 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 BTN1A1Q13410 526 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 CBLN2Q8IUK8 224 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 Q86TA4 180 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 PSG8Q9UQ74 426 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 AGRNO00468 2067 aa18.66■□□□□ 0.58
RFFL-206ENST00000447669 NOTCH3Q9UM47 2321 aa18.65■□□□□ 0.58
RFFL-206ENST00000447669 SAP30O75446 220 aa18.65■□□□□ 0.58
RFFL-206ENST00000447669 FLI1Q01543 452 aaPredicted RBP18.65■□□□□ 0.58
RFFL-206ENST00000447669 RBPMS2Q6ZRY4 209 aaKnown RBP18.65■□□□□ 0.58
RFFL-206ENST00000447669 K7EQG2 157 aa18.64■□□□□ 0.58
RFFL-206ENST00000447669 LTAP01374 205 aa18.64■□□□□ 0.58
RFFL-206ENST00000447669 PNRC1Q12796 327 aaPredicted RBP18.64■□□□□ 0.58
RFFL-206ENST00000447669 RNF212Q495C1 297 aa18.64■□□□□ 0.58
RFFL-206ENST00000447669 TMEM75Q8N9X5 138 aa18.64■□□□□ 0.58
RFFL-206ENST00000447669 ISOC2Q96AB3 205 aa18.64■□□□□ 0.58
RFFL-206ENST00000447669 LINC00482Q8N8I6 264 aa18.64■□□□□ 0.57
RFFL-206ENST00000447669 COL6A5A8TX70 2615 aa18.64■□□□□ 0.57
RFFL-206ENST00000447669 C8orf49Q96NF6 230 aa18.63■□□□□ 0.57
RFFL-206ENST00000447669 GPR61Q9BZJ8 451 aa18.63■□□□□ 0.57
RFFL-206ENST00000447669 K7EQM0 130 aa18.62■□□□□ 0.57
RFFL-206ENST00000447669 PSMG4Q5JS54 123 aa18.62■□□□□ 0.57
RFFL-206ENST00000447669 PRR27Q6MZM9 219 aa18.62■□□□□ 0.57
RFFL-206ENST00000447669 RNASE7Q9H1E1 156 aaKnown RBP18.62■□□□□ 0.57
RFFL-206ENST00000447669 PRELID1Q9Y255 219 aa18.62■□□□□ 0.57
RFFL-206ENST00000447669 AGPAT4-IT1Q9H0P7 198 aa18.62■□□□□ 0.57
RFFL-206ENST00000447669 RHEBQ15382 184 aa18.61■□□□□ 0.57
RFFL-206ENST00000447669 GDF5OSQ5U4N7 250 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms