RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RBMY1A1P0DJD3 496 aaKnown RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 RBMY1CP0DJD4 496 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 FGF6P10767 208 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 RBMY1FQ15415 496 aaKnown RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 TMEM155Q4W5P6 130 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 LY6G5CQ5SRR4 150 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 C1orf53Q5VUE5 145 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 FOXL2NBQ6ZUU3 175 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TCF20Q9UGU0 1960 aaKnown RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 TNFRSF4P43489 277 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 CD164Q04900 197 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TMEM196Q5HYL7 178 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 UBL5Q9BZL1 73 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 COL4A4P53420 1690 aaPredicted RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 IGLV3-32A0A0A0MS00 114 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 A0A0A6YYD4 124 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 LOC107984640A0A0U1RRK4 108 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 A0A1B0GUS0 222 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 LYZL6O75951 148 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 SHISA5Q8N114 240 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 RPUSD1Q9UJJ7 312 aaKnown RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 TRGV5A0A0B4J1U4 118 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 FHL1Q13642 323 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 METTL26Q96S19 204 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 SRXN1Q9BYN0 137 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 JPT2Q9H910 190 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 FAM60AQ9NP50 221 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TMEM74BQ9NUR3 256 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TP53TG1Q9Y2A0 90 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TNFRSF13BO14836 293 aaPredicted RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 IGLC6P0CF74 106 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 SCARF2Q96GP6 870 aaPredicted RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 SPAARA0A1B0GVQ0 90 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 METTL12A8MUP2 240 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 VWC2LB2RUY7 222 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 JMJD7-PLA2G4BH0Y9G9 81 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 H0YGX0 51 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 GP9P14770 177 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 C1orf61Q13536 156 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 MRPL14Q6P1L8 145 aaKnown RBP2.36□□□□□ -2.03
CHD9-203ENST00000447540 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 LENEPQ9Y5L5 61 aa2.36□□□□□ -2.03
CHD9-203ENST00000447540 TRAV3A0A0B4J244 114 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 M0R381 172 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 GFRA3O60609 400 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
CHD9-203ENST00000447540 Q8N1Y9 231 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 FOXB1Q99853 325 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 CPAMD8Q8IZJ3 1885 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 PRSS2P07478 247 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 ZNF137PP52743 207 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 ZNF826PQ6ZT77 177 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 IGKV1D-8A0A087WSZ0 117 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 CCDC179H3BU77 68 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 FCGR3BO75015 233 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
CHD9-203ENST00000447540 PRR31Q5SQ13 230 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 ZAR1Q86SH2 424 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 NABP1Q96AH0 204 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 TFF3Q07654 80 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 MDP1Q86V88 176 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 AGPAT4-IT1Q9H0P7 198 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 PRO0461Q9UI25 63 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 RASL10AQ92737 203 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 VKORC1Q9BQB6 163 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 DLL3Q9NYJ7 618 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 RFNGQ9Y644 331 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 TM4SF5O14894 197 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 ZMAT4Q9H898 229 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 WNT9BO14905 357 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 MRPL33O75394 65 aaKnown RBP2.35□□□□□ -2.03
CHD9-203ENST00000447540 PIGYQ3MUY2 71 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 C9orf85Q96MD7 179 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 J3QLI3 93 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 RBM3P98179 157 aaKnown RBP2.35□□□□□ -2.03
CHD9-203ENST00000447540 NNATQ16517 81 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 THSD7BQ9C0I4 1608 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 SOCS3O14543 225 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 ITGBL1O95965 494 aaPredicted RBP2.35□□□□□ -2.03
CHD9-203ENST00000447540 GFERP55789 205 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 SLC25A29Q8N8R3 303 aa2.35□□□□□ -2.03
CHD9-203ENST00000447540 B4GALT1P15291 398 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 DSCR4P56555 118 aaPredicted RBP2.34□□□□□ -2.03
CHD9-203ENST00000447540 PVRIGQ6DKI7 326 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 PCP2Q8IVA1 136 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 PRR7Q8TB68 274 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 D6R8Y8 96 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.03
CHD9-203ENST00000447540 SPANXN1Q5VSR9 72 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 ZNF497Q6ZNH5 498 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 IL11RAQ14626 422 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 TMEM243Q9BU79 118 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 U3KQK5 164 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 CD27P26842 260 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 EMC6Q9BV81 110 aa2.34□□□□□ -2.03
CHD9-203ENST00000447540 SIRPDQ9H106 197 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms