RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SH2D1AO60880 128 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 EGR2P11161 476 aaPredicted RBP7.36□□□□□ -1.23
KLHL3-202ENST00000447439 ERCC8Q13216 396 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 LY6DQ14210 128 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 C11orf71Q6IPW1 123 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 AMN1Q8IY45 258 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 KLHDC1Q8N7A1 406 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 SMAD5-AS1Q9Y6J3 95 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 TCF21O43680 179 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 PPIFP30405 207 aaKnown RBP7.35□□□□□ -1.23
KLHL3-202ENST00000447439 GPR183P32249 361 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 IFI27P40305 119 aaPredicted RBP7.35□□□□□ -1.23
KLHL3-202ENST00000447439 C16orf54Q6UWD8 224 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 WFDC3Q8IUB2 231 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 RNF5Q99942 180 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 SRSF8Q9BRL6 282 aaKnown RBP7.35□□□□□ -1.23
KLHL3-202ENST00000447439 UBTD1Q9HAC8 227 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 IGHV7-81A0A0B4J1V7 117 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 D6R8Y8 96 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 G3V318 75 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 K7EQM0 130 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 CTSGP08311 255 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 FBXL19-AS1Q494R0 122 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 ZNF562Q6V9R5 426 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 AAMDCQ9H7C9 122 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 LINC00527Q9UJ94 153 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 SELENOKQ9Y6D0 94 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 NCOR2Q9Y618 2525 aa7.35□□□□□ -1.23
KLHL3-202ENST00000447439 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 PRAC2D3DTV9 90 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 CT45A10P0DMU9 189 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 NDFIP1Q9BT67 221 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 PPP1R14DQ9NXH3 145 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 MSRB1Q9NZV6 116 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 ZFP30Q9Y2G7 519 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 SPTBN4Q9H254 2564 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 TRBV6-1A0A0K0K1D8 114 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 PCP4P48539 62 aa7.34□□□□□ -1.23
KLHL3-202ENST00000447439 NEU4Q8WWR8 484 aaPredicted RBP7.34□□□□□ -1.23
KLHL3-202ENST00000447439 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
KLHL3-202ENST00000447439 M0R1W7 72 aa7.34□□□□□ -1.24
KLHL3-202ENST00000447439 IGHG4P01861 327 aa7.34□□□□□ -1.24
KLHL3-202ENST00000447439 RIGQ13278 110 aa7.34□□□□□ -1.24
KLHL3-202ENST00000447439 MPV17L2Q567V2 206 aa7.34□□□□□ -1.24
KLHL3-202ENST00000447439 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.24
KLHL3-202ENST00000447439 C20orf202A1L168 122 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 CSN1S1P47710 185 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 KLRB1Q12918 225 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 GAGE1Q13065 139 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 C15orf32Q32M92 178 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 Q6ZQT7 251 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 TMEM219Q86XT9 240 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 TTC9CQ8N5M4 171 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 Q8N9W7 124 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 MAP1AP78559 2803 aaPredicted RBP7.33□□□□□ -1.24
KLHL3-202ENST00000447439 ATP6V0E1O15342 81 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 CLEC3BP05452 202 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 FA2HQ7L5A8 372 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 Q8N6K4 173 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
KLHL3-202ENST00000447439 OR5AL1P0C617 328 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 TWIST1Q15672 202 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 CLEC19AQ6UXS0 136 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 PRR25Q96S07 402 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 RABAC1Q9UI14 185 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 RNF24Q9Y225 148 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 SPTAN1Q13813 2472 aaKnown RBP7.32□□□□□ -1.24
KLHL3-202ENST00000447439 A0A087X0K7 114 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 A0A096LNJ9 63 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 SAA4P35542 130 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 UQCRFS1P47985 274 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 RHOGP84095 191 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 BPESC1Q9GZL8 116 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 SIGLEC8Q9NYZ4 499 aa7.32□□□□□ -1.24
KLHL3-202ENST00000447439 TRAV30A0A087WSZ9 112 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 CCL25O15444 150 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 ORM1P02763 201 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 LYPD1Q8N2G4 141 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 AJUBAQ96IF1 538 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 SIRPDQ9H106 197 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 MRPS16Q9Y3D3 137 aaKnown RBP7.31□□□□□ -1.24
KLHL3-202ENST00000447439 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 CRXO43186 299 aaPredicted RBP7.31□□□□□ -1.24
KLHL3-202ENST00000447439 SPRY2O43597 315 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 NUDT3O95989 172 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
KLHL3-202ENST00000447439 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 PRELID3AQ96N28 172 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 TMEM191AQ9H0A3 160 aa7.31□□□□□ -1.24
KLHL3-202ENST00000447439 CSMD2Q7Z408 3487 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms