RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TMEM97Q5BJF2 176 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 NPFFR1Q9GZQ6 430 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 HILPDAQ9Y5L2 63 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 S4R3C0 116 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 AKAP13Q12802 2813 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 HBDP02042 147 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 RPL7P18124 248 aaKnown RBP14.92□□□□□ -0.02
SDCBP-204ENST00000447182 FOXE3Q13461 319 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 TTC9CQ8N5M4 171 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 IGFBPL1Q8WX77 278 aa14.92□□□□□ -0.02
SDCBP-204ENST00000447182 TMSB15BA0A087X1C1 80 aa14.91□□□□□ -0.02
SDCBP-204ENST00000447182 ZNF562Q6V9R5 426 aa14.91□□□□□ -0.02
SDCBP-204ENST00000447182 BOD1L2Q8IYS8 172 aa14.91□□□□□ -0.02
SDCBP-204ENST00000447182 CST9LQ9H4G1 147 aa14.91□□□□□ -0.02
SDCBP-204ENST00000447182 TRAV8-6A0A0B4J262 113 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 ODF3BA8MYP8 253 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 PPBPP02775 128 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 VKORC1Q9BQB6 163 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 C21orf62Q9NYP8 219 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 IGKV2-40A0A087WW87 121 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-204ENST00000447182 C7orf71A4D174 169 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 IGKV2D-40P01614 121 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-204ENST00000447182 EGR2P11161 476 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-204ENST00000447182 SRSF2Q01130 221 aaKnown RBP14.9□□□□□ -0.02
SDCBP-204ENST00000447182 NHLH1Q02575 133 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 TPRP12270 2363 aaKnown RBP14.9□□□□□ -0.02
SDCBP-204ENST00000447182 ZNF292O60281 2723 aa14.9□□□□□ -0.02
SDCBP-204ENST00000447182 DCHS1Q96JQ0 3298 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 M0R1W7 72 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 IGLC6P0CF74 106 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 BMI1P35226 326 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 ARPC1AQ92747 370 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 ATMQ13315 3056 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 SIVA1O15304 175 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 SNAI2O43623 268 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 PRR30Q53SZ7 412 aaPredicted RBP14.89□□□□□ -0.03
SDCBP-204ENST00000447182 FER1L6-AS1Q8NA97 138 aa14.89□□□□□ -0.03
SDCBP-204ENST00000447182 CKS2P33552 79 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 CACNG7P62955 275 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 OCIAD2Q56VL3 154 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 OR9G4Q8NGQ1 327 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 THYN1Q9P016 225 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 RABAC1Q9UI14 185 aa14.88□□□□□ -0.03
SDCBP-204ENST00000447182 HES1Q14469 280 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 IFI27L1Q96BM0 104 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 NPYP01303 97 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 PRTN3P24158 256 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 ZNF575Q86XF7 245 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 LINC01560Q8TB33 94 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 CNFNQ9BYD5 112 aa14.87□□□□□ -0.03
SDCBP-204ENST00000447182 LINC01546A6NGU7 62 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 SMAD7O15105 426 aaKnown RBP14.86□□□□□ -0.03
SDCBP-204ENST00000447182 IGHG4P01861 327 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 ZNF80P51504 273 aaPredicted RBP14.86□□□□□ -0.03
SDCBP-204ENST00000447182 NDPQ00604 133 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 TWIST1Q15672 202 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 SMAD5-AS1Q9Y6J3 95 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 SCGB2A1O75556 95 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 KLRD1Q13241 179 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 PSMG3-AS1Q96PY0 264 aa14.86□□□□□ -0.03
SDCBP-204ENST00000447182 GAGE12BA1L429 117 aa14.85□□□□□ -0.03
SDCBP-204ENST00000447182 A6NDN8 102 aa14.85□□□□□ -0.03
SDCBP-204ENST00000447182 H3BRM9 83 aa14.85□□□□□ -0.03
SDCBP-204ENST00000447182 CTSGP08311 255 aa14.85□□□□□ -0.03
SDCBP-204ENST00000447182 VGLL1Q99990 258 aa14.85□□□□□ -0.03
SDCBP-204ENST00000447182 NDUFS7O75251 213 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 HSD52Q0P140 79 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 FBXL19-AS1Q494R0 122 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 Q8N6K4 173 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 A1L4Q6 167 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 SMKR1H3BMG3 65 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 S100A7P31151 101 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 RNF151Q2KHN1 245 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 CCDC144NLQ6NUI1 221 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 OR4X2Q8NGF9 303 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 Q8TAT8 98 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 PIFOQ8TCI5 191 aa14.84□□□□□ -0.03
SDCBP-204ENST00000447182 C9orf118A6NHY6 69 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 FXYD7P58549 80 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 EBI3Q14213 229 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 ADAMTSL5Q6ZMM2 481 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 RNF185Q96GF1 192 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 TIMD4Q96H15 378 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 PIEZO2Q9H5I5 2752 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 OOSP1A8MZH6 123 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 PSMG4Q5JS54 123 aa14.83□□□□□ -0.04
SDCBP-204ENST00000447182 COL25A1Q9BXS0 654 aaPredicted RBP14.83□□□□□ -0.04
SDCBP-204ENST00000447182 ARHGAP32A7KAX9 2087 aa14.82□□□□□ -0.04
SDCBP-204ENST00000447182 GVINP1Q7Z2Y8 2422 aa14.82□□□□□ -0.04
SDCBP-204ENST00000447182 UFSP1Q6NVU6 142 aa14.82□□□□□ -0.04
SDCBP-204ENST00000447182 MAP1LC3AQ9H492 121 aa14.82□□□□□ -0.04
SDCBP-204ENST00000447182 TACC2O95359 2948 aa14.82□□□□□ -0.04
SDCBP-204ENST00000447182 A0A1W2PRD5 423 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 A0A1W2PRF3 423 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 A0A1W2PRM7 423 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 NCBP2LA6PVI3 153 aaKnown RBP14.81□□□□□ -0.04
SDCBP-204ENST00000447182 FABP5P3A8MUU1 101 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 IGHV3-23P01764 117 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 C1orf122Q6ZSJ8 110 aa14.81□□□□□ -0.04
SDCBP-204ENST00000447182 GAGE10A6NGK3 116 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms