RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MT-ATP8P03928 68 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 RNF125Q96EQ8 232 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 AHRRA9YTQ3 701 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 TDHQ8IZJ6 230 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 FBXL15Q9H469 300 aa6.39□□□□□ -1.39
SMG1-202ENST00000446231 RBBP6Q7Z6E9 1792 aaKnown RBP6.39□□□□□ -1.39
SMG1-202ENST00000446231 PRO1854Q9UHT4 67 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 CFHR1Q03591 330 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 C15orf53Q8NAA6 179 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 S4R3C0 116 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 IGLV3-1P01715 115 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 CTRLP40313 264 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 PPP1R27Q86WC6 154 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 CD3EP07766 207 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 LTAP01374 205 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 IGHV3-23P01764 117 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 LINC01549A6NIU2 74 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 FAM201AQ5SY85 155 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 PMS2CLQ68D20 193 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 PMS2P5A8MQ11 134 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 CEACAM4O75871 244 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 PMVKQ15126 192 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
SMG1-202ENST00000446231 PVRIGQ6DKI7 326 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 SRSF8Q9BRL6 282 aaKnown RBP6.37□□□□□ -1.39
SMG1-202ENST00000446231 XIRP1Q702N8 1843 aaKnown RBP6.37□□□□□ -1.39
SMG1-202ENST00000446231 FNDC1Q4ZHG4 1894 aaPredicted RBP6.37□□□□□ -1.39
SMG1-202ENST00000446231 IGHV3OR16-8A0A075B7F1 116 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 FAM74A4Q5TZK3 123 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 HLA-DMBP28068 263 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 NDUFV3P56181 108 aaKnown RBP6.37□□□□□ -1.39
SMG1-202ENST00000446231 FXYD2P54710 66 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 TMEM75Q8N9X5 138 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 TMEM133Q9H2Q1 129 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 AKAP13Q12802 2813 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 CNTFRP26992 372 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 IGKV3-7A0A075B6H7 116 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 NUP37Q8NFH4 326 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 TP53TG3Q9ULZ0 132 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 FAM159AQ6UWV7 190 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 ZNF576Q9H609 170 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 Q6ZR03 302 aa6.37□□□□□ -1.39
SMG1-202ENST00000446231 LINC00312Q9Y6C7 94 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 C10orf55Q5SWW7 151 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 PRADC1Q9BSG0 188 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 SPAARA0A1B0GVQ0 90 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 OR11H6Q8NGC7 330 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 PLXNB2O15031 1838 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 SUMO2P61956 95 aaKnown RBP6.36□□□□□ -1.39
SMG1-202ENST00000446231 GGNQ86UU5 652 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 SLC50A1Q9BRV3 221 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 CD177Q8N6Q3 437 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
SMG1-202ENST00000446231 NEU4Q8WWR8 484 aaPredicted RBP6.36□□□□□ -1.39
SMG1-202ENST00000446231 E9PLD3 99 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 POU2AF1Q16633 256 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 EEF1AKMT3Q96AZ1 226 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 PINLYPA6NC86 204 aa6.36□□□□□ -1.39
SMG1-202ENST00000446231 KRTAP27-1Q3LI81 207 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 IGF2BP2-AS1Q96M15 143 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 C2orf70A6NJV1 201 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 FAM120AOSQ5T036 256 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 MORN3Q6PF18 240 aaPredicted RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 A0A087WX48 190 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 C1orf162Q8NEQ5 155 aaPredicted RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 EPG5Q9HCE0 2579 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 SLC25A20O43772 301 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 TMEM14CQ9P0S9 112 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 ATRQ13535 2644 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 B3GALT5-AS1P59052 145 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 SPAG8Q99932 426 aaPredicted RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 TP73-AS1Q9UF72 201 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 RPUSD1Q9UJJ7 312 aaKnown RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 TRBV7-9A0A0J9YWB2 115 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 C15orf65H3BRN8 121 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 PRR20EP86478 221 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 PRR20CP86479 221 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 PRR20DP86480 221 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 PRR20BP86481 221 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 PRR20AP86496 221 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 C14orf178Q8N769 122 aaPredicted RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 ANKRD17O75179 2603 aaKnown RBP6.35□□□□□ -1.39
SMG1-202ENST00000446231 Q6ZT83 130 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 ANAPC1Q9H1A4 1944 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 SHISA9B4DS77 424 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 Q6ZUT4 128 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 Q8TAT8 98 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 HLA-DRB4P13762 266 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 IGHV1-2P23083 117 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 FOXI1Q12951 378 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 HLA-DRB4X5D2U9 266 aa6.35□□□□□ -1.39
SMG1-202ENST00000446231 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms