RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 IGKV1-27A0A075B6S5 117 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 EFNA2O43921 213 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 TEX36Q5VZQ5 186 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 NIT1Q86X76 327 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 LINC00311Q8N616 119 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 PRR30Q53SZ7 412 aaPredicted RBP9.49□□□□□ -0.89
FN1-212ENST00000446046 IGKV1-12A0A0C4DH73 117 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 IGKV1D-12P01611 117 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 FXYD7P58549 80 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 CHAC1Q9BUX1 264 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 SPCS1Q9Y6A9 102 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 ZNF833PQ6ZTB9 187 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 CDKN1BP46527 198 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 LHFPL1Q86WI0 220 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 TMEM256Q8N2U0 113 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 GFRA4Q9GZZ7 299 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 INS-IGF2F8WCM5 200 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 RPRMLQ8N4K4 120 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 CSTL1Q9H114 145 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 ATP6V0E1O15342 81 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 AZU1P20160 251 aa9.48□□□□□ -0.89
FN1-212ENST00000446046 PPIFP30405 207 aaKnown RBP9.48□□□□□ -0.89
FN1-212ENST00000446046 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 SH2D1AO60880 128 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 CCL24O00175 119 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 DMRTC2Q8IXT2 367 aaPredicted RBP9.47□□□□□ -0.89
FN1-212ENST00000446046 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
FN1-212ENST00000446046 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 OVOL3O00110 214 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 LY6HO94772 140 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 IGHV4-39P01824 125 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 TFF1P04155 84 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 RUSC1-AS1Q66K80 236 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 IL17DQ8TAD2 202 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 TCRAP04437 139 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 CGB7P0DN87 165 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 FAM19A2Q8N3H0 131 aa9.47□□□□□ -0.89
FN1-212ENST00000446046 FOXG1P55316 489 aaPredicted RBP9.46□□□□□ -0.89
FN1-212ENST00000446046 LY6G5BQ8NDX9 201 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 ST6GALNAC6Q969X2 333 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 A0A1B0GW64 132 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 C14orf144Q96I85 54 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 IGLV1-44P01699 117 aa9.46□□□□□ -0.89
FN1-212ENST00000446046 IGHV3-53P01767 116 aa9.46□□□□□ -0.9
FN1-212ENST00000446046 VWC2Q2TAL6 325 aa9.46□□□□□ -0.9
FN1-212ENST00000446046 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.9
FN1-212ENST00000446046 HIVEP3Q5T1R4 2406 aa9.46□□□□□ -0.9
FN1-212ENST00000446046 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 RNASE2P10153 161 aaKnown RBP9.45□□□□□ -0.9
FN1-212ENST00000446046 TMEM95Q3KNT9 176 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 A0A1W2PPI3 338 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 D6R8Y8 96 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 ADMP35318 185 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 CTAG1AP78358 180 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
FN1-212ENST00000446046 SPXQ9BT56 116 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 I3L3M4 83 aa9.45□□□□□ -0.9
FN1-212ENST00000446046 LDLRAD4O15165 306 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 NHP2Q9NX24 153 aaKnown RBP9.44□□□□□ -0.9
FN1-212ENST00000446046 KLF17Q5JT82 389 aaPredicted RBP9.44□□□□□ -0.9
FN1-212ENST00000446046 RNF222A6NCQ9 220 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 DKK4Q9UBT3 224 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 SHISA3A0PJX4 238 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 C22orf46C9J442 243 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 H3BMM0 161 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 SERF1AO75920 110 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 IGKV1-16P04430 117 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
FN1-212ENST00000446046 LYZL1Q6UWQ5 148 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 ANAPC10Q9UM13 185 aa9.44□□□□□ -0.9
FN1-212ENST00000446046 C8orf31Q8N9H6 132 aa9.43□□□□□ -0.9
FN1-212ENST00000446046 SLX1AQ9BQ83 275 aa9.43□□□□□ -0.9
FN1-212ENST00000446046 LINC00473A8K010 186 aa9.43□□□□□ -0.9
FN1-212ENST00000446046 PFN1P07737 140 aaKnown RBP9.43□□□□□ -0.9
FN1-212ENST00000446046 LAIR2Q6ISS4 152 aa9.43□□□□□ -0.9
FN1-212ENST00000446046 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms