RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
LAPTM4B-201ENST00000445593 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 Q86TA4 180 aa13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 MEGF9Q9H1U4 602 aa13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 RCHY1Q96PM5 261 aa13.11□□□□□ -0.31
LAPTM4B-201ENST00000445593 MUC21A0A0G2JKD1 596 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 MUC21A0A140T8X8 626 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 PMCHP20382 165 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 MUC21Q5SSG8 566 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 GDF5OSQ5U4N7 250 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 LINC00310P59036 64 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 ZNF253O75346 499 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 Q8TAT8 98 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 ZNF414Q96IQ9 312 aa13.1□□□□□ -0.31
LAPTM4B-201ENST00000445593 IGHV1-69DA0A0B4J2H0 117 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 H3BUX3 64 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 IGHV1-69P01742 117 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 UBE2V1Q13404 147 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 ATOH7Q8N100 152 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 HIF1ANQ9NWT6 349 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 CHD6Q8TD26 2715 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 BMPR1BO00238 502 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 SAP30O75446 220 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 LTAP01374 205 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 APCSP02743 223 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 Q6ZN92 141 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
LAPTM4B-201ENST00000445593 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 FOXA3P55318 350 aaPredicted RBP13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 OCIAD2Q56VL3 154 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 GTSF1Q8WW33 167 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 TEX15Q9BXT5 2789 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 AVPP01185 164 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 IGLV2-11P01706 119 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 NTF3P20783 257 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 PAX8Q06710 450 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 MLST8Q9BVC4 326 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
LAPTM4B-201ENST00000445593 Q6ZS46 218 aa13.07□□□□□ -0.32
LAPTM4B-201ENST00000445593 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
LAPTM4B-201ENST00000445593 RNF182Q8N6D2 247 aa13.07□□□□□ -0.32
LAPTM4B-201ENST00000445593 FAM110DQ8TAY7 271 aaPredicted RBP13.07□□□□□ -0.32
LAPTM4B-201ENST00000445593 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
LAPTM4B-201ENST00000445593 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 TRAV9-1A0A075B6T8 112 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 CCDC140Q96MF4 163 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 BLCAPP62952 87 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 TMEM8BA6NDV4 472 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 FAM231DQ6ZW35 169 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 PIFOQ8TCI5 191 aa13.06□□□□□ -0.32
LAPTM4B-201ENST00000445593 CUBNO60494 3623 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 KRTDAPP60985 99 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 IGKV3-7A0A075B6H7 116 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 MSMBP08118 114 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 TP73-AS1Q9UF72 201 aa13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 TIMM8BQ9Y5J9 83 aaPredicted RBP13.05□□□□□ -0.32
LAPTM4B-201ENST00000445593 KIR2DL5BA0A0G2JN68 375 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 KIR2DL5BA0A0G2JPC4 375 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 DIRC3C9JPN6 131 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 AMTP48728 403 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 KIR2DL5AQ8N109 375 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 UBR5O95071 2799 aaPredicted RBP13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 TRGV3P03979 118 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 Q6ZWC4 215 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 SMAD5-AS1Q9Y6J3 95 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 NBPF19A0A087WUL8 3843 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms