RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 FXYD5Q96DB9 178 aa12.67□□□□□ -0.38
SMARCAL1-209ENST00000444508 PRELID1Q9Y255 219 aa12.67□□□□□ -0.38
SMARCAL1-209ENST00000444508 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
SMARCAL1-209ENST00000444508 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
SMARCAL1-209ENST00000444508 PRB4P10163 310 aaPredicted RBP12.66□□□□□ -0.38
SMARCAL1-209ENST00000444508 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
SMARCAL1-209ENST00000444508 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-209ENST00000444508 X6R8D5 127 aa12.66□□□□□ -0.38
SMARCAL1-209ENST00000444508 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 IGHV4-28A0A0C4DH34 117 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 M0R2Z0 102 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 DEFB4AO15263 64 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 JTBO76095 146 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 INSP01308 110 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 CDC34P49427 236 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 Q6ZNX1 250 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 Q8NAQ8 132 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 SH3BGRL3Q9H299 93 aa12.65□□□□□ -0.38
SMARCAL1-209ENST00000444508 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 M0R3E3 92 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 ZNF345Q14585 488 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 ICAM4Q14773 271 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 PQLC2Q6ZP29 291 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 ZNF503Q96F45 646 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 PHYHIPLQ96FC7 376 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 STARD9Q9P2P6 4700 aa12.64□□□□□ -0.39
SMARCAL1-209ENST00000444508 CSMD3Q7Z407 3707 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 CXorf65A6NEN9 183 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 SMIM9A6NGZ8 99 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 KCNRGQ8N5I3 272 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 C11orf45Q8TAV5 145 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 NEU1Q99519 415 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
SMARCAL1-209ENST00000444508 A0A0D9SG52 128 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 TSPOP30536 169 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 CDKN1BP46527 198 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 PMS2P11Q13670 270 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 LYPD1Q8N2G4 141 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 RPP25LQ8N5L8 163 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
SMARCAL1-209ENST00000444508 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 TRAV12-2A0A075B6T6 113 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 HMGB3O15347 200 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 CRXO43186 299 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 HBE1P02100 147 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 RBMY1A1P0DJD3 496 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 RBMY1CP0DJD4 496 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 CSN1S1P47710 185 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 RBMY1FQ15415 496 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 C1orf158Q8N1D5 194 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 RAB24Q969Q5 203 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 Q9H3A6 140 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 CYTL1Q9NRR1 136 aa12.61□□□□□ -0.39
SMARCAL1-209ENST00000444508 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
SMARCAL1-209ENST00000444508 LEPP41159 167 aa12.6□□□□□ -0.39
SMARCAL1-209ENST00000444508 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
SMARCAL1-209ENST00000444508 hCG_2014768A0A024R1R8 64 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 STAG3L2P0CL84 134 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 ERCC8Q13216 396 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 FAM74A1Q5RGS3 127 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 ODF3Q96PU9 254 aa12.59□□□□□ -0.39
SMARCAL1-209ENST00000444508 KMT2CQ8NEZ4 4911 aaKnown RBP12.58□□□□□ -0.39
SMARCAL1-209ENST00000444508 BCL2L11O43521 198 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 PFDN1O60925 122 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 RRN3P1Q2M238 152 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 TMEM78Q5T7P6 136 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 RXFP4Q8TDU9 374 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
SMARCAL1-209ENST00000444508 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 CXorf1O96002 111 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 EMP1P54849 157 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 CMTM2Q8TAZ6 248 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 HYLS1Q96M11 299 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 LINC01587Q99440 93 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 ZNF471Q9BX82 626 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
SMARCAL1-209ENST00000444508 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
SMARCAL1-209ENST00000444508 LOC102723971A0A1B0GUV8 181 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms