RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ZNF664Q8N3J9 261 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 MSMBP08118 114 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 IFI27P40305 119 aaPredicted RBP17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 FAM110DQ8TAY7 271 aaPredicted RBP17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 LINC00477Q96M19 166 aa17.93■□□□□ 0.46
CTDSPL-206ENST00000443503 TRBV19A0A075B6N1 114 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 TRAV12-3A0A0B4J271 114 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 H3BUT2 72 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 MCRIP2Q9BUT9 160 aaKnown RBP17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 A6NNC1 897 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 NHP2Q9NX24 153 aaKnown RBP17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 CEP295Q9C0D2 2601 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 TMEM249Q2WGJ8 235 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 C2orf88Q9BSF0 95 aa17.92■□□□□ 0.46
CTDSPL-206ENST00000443503 IGHV2-70DA0A0C4DH43 119 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 LHBP01229 141 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 hDV102S1A0JD36 115 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 FAM223BA6NKX1 122 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 FAM223AQ8IWN6 122 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 RNF182Q8N6D2 247 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 PLA2G2EQ9NZK7 142 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 IGLC1P0CG04 106 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 TMEM101Q96IK0 257 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 SPCS1Q9Y6A9 102 aa17.91■□□□□ 0.46
CTDSPL-206ENST00000443503 NAV2Q8IVL1 2488 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 C14orf178Q8N769 122 aaPredicted RBP17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 SEM1Q6ZVN7 128 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 KIAA1549LQ6ZVL6 1849 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 TRGV11A0A075B6L2 103 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 IGKCP01834 107 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 SLC25A16P16260 332 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 TOMM7Q9P0U1 55 aa17.9■□□□□ 0.46
CTDSPL-206ENST00000443503 IGHV1-69DA0A0B4J2H0 117 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 IGHV1-69P01742 117 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 V9GYV3 84 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 TYMSP04818 313 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 LAGE3Q14657 143 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 SFTA2Q6UW10 78 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 DAZ1Q9NQZ3 744 aaKnown RBP17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 C18orf32Q8TCD1 76 aa17.89■□□□□ 0.45
CTDSPL-206ENST00000443503 ARHGAP21Q5T5U3 1957 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 NDUFS8O00217 210 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 Q0VG73 95 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 ASPHD1Q5U4P2 390 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 RNF223E7ERA6 249 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 SYS1-DBNDD2H3BUS1 97 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 C11orf52Q96A22 123 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 IGKV3D-20A0A0C4DH25 116 aa17.88■□□□□ 0.45
CTDSPL-206ENST00000443503 TMEM213A2RRL7 107 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 CHTOPQ9Y3Y2 248 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 CD300EQ496F6 205 aaPredicted RBP17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 IGF2-ASQ6U949 168 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 ZNF492Q9P255 531 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 C2CD3Q4AC94 2353 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 SSBP2P81877 361 aaPredicted RBP17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 LINC01356Q8N9X3 169 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 TMEM8BA6NDV4 472 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 SYNJ2BPP57105 145 aa17.87■□□□□ 0.45
CTDSPL-206ENST00000443503 IGLC7A0M8Q6 106 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 C5orf30Q96GV9 206 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 MS4A6AQ9H2W1 248 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 IGHV2-5P01817 119 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 HTN3P15516 51 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 LINC00469Q8N7U9 141 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 GFRA4Q9GZZ7 299 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 DPH3P1Q9H4G8 78 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 GTSCR1Q86UQ5 136 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 C8orf49Q96NF6 230 aa17.86■□□□□ 0.45
CTDSPL-206ENST00000443503 H3BRM9 83 aa17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 FXYD5Q96DB9 178 aa17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 COPS9Q8WXC6 57 aa17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 LSM4Q9Y4Z0 139 aaKnown RBP17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 ABCA2Q9BZC7 2435 aa17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 TMEM131Q92545 1883 aa17.85■□□□□ 0.45
CTDSPL-206ENST00000443503 TMEM75Q8N9X5 138 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 OR13C6PQ8NH95 151 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 ORAOV1Q8WV07 137 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 IGFBPL1Q8WX77 278 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 THAP8Q8NA92 274 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 IGHV3-73A0A0B4J1V6 119 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 MSMPQ1L6U9 139 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 NSUN5P1Q3KNT7 163 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 A0A1B0GWB2 263 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 SLAQ13239 276 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 VWC2Q2TAL6 325 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 LCNL1Q6ZST4 164 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 TMEM158Q8WZ71 300 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
CTDSPL-206ENST00000443503 ZNF815PA8K554 130 aa17.83■□□□□ 0.45
CTDSPL-206ENST00000443503 IGHV2-70P01814 119 aa17.83■□□□□ 0.45
CTDSPL-206ENST00000443503 GUSBP1Q15486 140 aa17.83■□□□□ 0.45
CTDSPL-206ENST00000443503 ZNF876PQ49A33 203 aa17.83■□□□□ 0.45
CTDSPL-206ENST00000443503 CT83Q5H943 113 aa17.83■□□□□ 0.45
CTDSPL-206ENST00000443503 FAM231BA6NCW3 169 aa17.83■□□□□ 0.44
CTDSPL-206ENST00000443503 SP5Q6BEB4 398 aaPredicted RBP17.83■□□□□ 0.44
CTDSPL-206ENST00000443503 CD28P10747 220 aa17.83■□□□□ 0.44
CTDSPL-206ENST00000443503 FAM231DQ6ZW35 169 aa17.83■□□□□ 0.44
CTDSPL-206ENST00000443503 IL17RELQ6ZVW7 336 aa17.82■□□□□ 0.44
CTDSPL-206ENST00000443503 KLHL30-AS1Q8NEE0 82 aa17.82■□□□□ 0.44
CTDSPL-206ENST00000443503 H3BRN7 92 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms