RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 PCNPQ8WW12 178 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-204ENST00000442842 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
TM9SF4-204ENST00000442842 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-204ENST00000442842 MGAM2Q2M2H8 2515 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 PGPA6NDG6 321 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 CCL20P78556 96 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 HIST1H1AQ02539 215 aaPredicted RBP10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 OR4B1Q8NGF8 309 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 CMTM2Q8TAZ6 248 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 MRPL53Q96EL3 112 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 SAV1Q9H4B6 383 aaPredicted RBP10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 CLEC5AQ9NY25 188 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
TM9SF4-204ENST00000442842 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 SLC25A5P05141 298 aaKnown RBP10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 CSN1S1P47710 185 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 GNG5P63218 68 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 BLOC1S1P78537 153 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 PRELID1Q9Y255 219 aa10.03□□□□□ -0.8
TM9SF4-204ENST00000442842 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.8
TM9SF4-204ENST00000442842 LOC102724200A0A096LPH7 203 aaPredicted RBP10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 A0A0J9YX75 114 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 A0A1W2PRE2 83 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 FAM74A7A6NL05 159 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 PAGE4O60829 102 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 FRMD6-AS1P0C7T7 363 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 ATP5G3P48201 142 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 CNN1P51911 297 aaKnown RBP10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 CST9LP1Q5W188 147 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 OR8A1Q8NGG7 326 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
TM9SF4-204ENST00000442842 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 RBMY1BA6NDE4 496 aaKnown RBP10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 RBMY1EA6NEQ0 496 aaKnown RBP10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 H3BMM0 161 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 IFNA1P01562 189 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 RBMY1DP0C7P1 496 aaKnown RBP10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 PPT1P50897 306 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 MANBALQ9NQG1 85 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
TM9SF4-204ENST00000442842 DUSP14O95147 198 aaKnown RBP10□□□□□ -0.81
TM9SF4-204ENST00000442842 FXYD7P58549 80 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 ERCC8Q13216 396 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 C5orf17Q8NAS9 161 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 RXFP4Q8TDU9 374 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 PPP1R14DQ9NXH3 145 aa10□□□□□ -0.81
TM9SF4-204ENST00000442842 NOTCH3Q9UM47 2321 aa9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 DIRC3C9JPN6 131 aa9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 IFITM2Q01629 132 aa9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 HAGHQ16775 308 aa9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 ARL2-SNX15V9GYD0 113 aa9.99□□□□□ -0.81
TM9SF4-204ENST00000442842 A8MZ25 164 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 C11orf94C9JXX5 98 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 PEX7O00628 323 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 TCRAP04437 139 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 NMBP08949 121 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 BCL2P10415 239 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 APOC4P55056 127 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 RAB14P61106 215 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 TMEM78Q5T7P6 136 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 ZNF767PQ75MW2 155 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 Q8TAT8 98 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 ASCL2Q99929 193 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 VGLL1Q99990 258 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 EPDR1Q9UM22 224 aa9.98□□□□□ -0.81
TM9SF4-204ENST00000442842 J3KRW8 73 aa9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 ATG101Q9BSB4 218 aa9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 NKX6-2Q9C056 277 aaPredicted RBP9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 NOTCH1P46531 2555 aa9.97□□□□□ -0.81
TM9SF4-204ENST00000442842 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 K7EQM0 130 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 M0R2Z0 102 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 TOR2AQ5JU69 321 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 LINC00322Q6ZN03 302 aaPredicted RBP9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 CSTL1Q9H114 145 aa9.96□□□□□ -0.82
TM9SF4-204ENST00000442842 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
TM9SF4-204ENST00000442842 AKR1C3P42330 323 aa9.95□□□□□ -0.82
TM9SF4-204ENST00000442842 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
TM9SF4-204ENST00000442842 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
TM9SF4-204ENST00000442842 AMTNQ6UX39 209 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms