RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
TRAPPC12-210ENST00000441983 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
TRAPPC12-210ENST00000441983 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 Q6ZWC4 215 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 OR8A1Q8NGG7 326 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 RXFP4Q8TDU9 374 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 MBD3L1Q8WWY6 194 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 CSTL1Q9H114 145 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 OTORQ9NRC9 128 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 TGP01266 2768 aa11.14□□□□□ -0.63
TRAPPC12-210ENST00000441983 AGRNO00468 2067 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 H3BTX0 84 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 NKX2-5P52952 324 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 ODF3Q96PU9 254 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 Q9H3A6 140 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 NBEAL2Q6ZNJ1 2754 aa11.13□□□□□ -0.63
TRAPPC12-210ENST00000441983 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 HMGB3O15347 200 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 AMBPP02760 352 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 SLC25A5P05141 298 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 CSN1S1P47710 185 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 PPT1P50897 306 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 ICAM4Q14773 271 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 GDF5OSQ5U4N7 250 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 OR10J6PQ8NGY7 276 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
TRAPPC12-210ENST00000441983 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 RBAKDNA6NC62 111 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 H2AFB1P0C5Y9 115 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 FHITP49789 147 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 TCEAL7Q9BRU2 100 aa11.11□□□□□ -0.63
TRAPPC12-210ENST00000441983 TRBV7-9A0A0J9YWB2 115 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 F6UB75 175 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 M0R3E3 92 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 CA1P00915 261 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 HBE1P02100 147 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 OR4B1Q8NGF8 309 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 CMTM2Q8TAZ6 248 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 SFT2D1Q8WV19 159 aa11.1□□□□□ -0.63
TRAPPC12-210ENST00000441983 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 AMTNQ6UX39 209 aa11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 IQCF2Q8IXL9 164 aa11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 C5orf17Q8NAS9 161 aa11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
TRAPPC12-210ENST00000441983 PGPA6NDG6 321 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 ZNF705FA8MVS1 300 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 BOLA2-SMG1P6H3BVE0 249 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 RNF183Q96D59 192 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 RCHY1Q96PM5 261 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 PPP1R14DQ9NXH3 145 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 TENM3Q9P273 2699 aa11.08□□□□□ -0.64
TRAPPC12-210ENST00000441983 STAB2Q8WWQ8 2551 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 K7EQM0 130 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 NMBP08949 121 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 TSPOP30536 169 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 DEFB1P60022 68 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 TMEM78Q5T7P6 136 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 ASCL2Q99929 193 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 LENEPQ9Y5L5 61 aa11.07□□□□□ -0.64
TRAPPC12-210ENST00000441983 FAM74A7A6NL05 159 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 ZNF705EA8MWA4 302 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 GGTLC3B5MD39 225 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 SPRY2O43597 315 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 GIG44P09565 113 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 TAGLN2P37802 199 aaKnown RBP11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 CDKN1BP46527 198 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 BLOC1S1P78537 153 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 TXNDC17Q9BRA2 123 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 TMPRSS5Q9H3S3 457 aa11.06□□□□□ -0.64
TRAPPC12-210ENST00000441983 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms