RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 Q86TA4 180 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 RTL8AQ9BWD3 113 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 STOML2Q9UJZ1 356 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 JPT1Q9UK76 154 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 NCAPD3P42695 1498 aa0.41□□□□□ -2.34
PFDN4-202ENST00000441080 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.34
PFDN4-202ENST00000441080 MFSD11O43934 449 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 CST7O76096 145 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 RPL35P42766 123 aaKnown RBP0.4□□□□□ -2.35
PFDN4-202ENST00000441080 FXYD6P3P58550 94 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 DIAPH2-AS1Q14236 149 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 RTL8BQ17RB0 113 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 VMA21Q3ZAQ7 101 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 TMED4Q7Z7H5 227 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 LIMD2Q9BT23 127 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 OR2H1Q9GZK4 316 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 CST11Q9H112 138 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 MYLKQ15746 1914 aa0.4□□□□□ -2.35
PFDN4-202ENST00000441080 PIAS1O75925 651 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 CSN2P05814 226 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 GNG3P63215 75 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 BASP1P80723 227 aaKnown RBP0.39□□□□□ -2.35
PFDN4-202ENST00000441080 FKBP1CQ5VVH2 108 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 CROCCP2Q86T23 111 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 NEK7Q8TDX7 302 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 CAMSAP2Q08AD1 1489 aa0.39□□□□□ -2.35
PFDN4-202ENST00000441080 CD109Q6YHK3 1445 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 FANCMQ8IYD8 2048 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 MT-ND6P03923 174 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 CCL4P13236 92 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 SMIM20Q8N5G0 67 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 AP3S1Q92572 193 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 RMND5BQ96G75 393 aaPredicted RBP0.38□□□□□ -2.35
PFDN4-202ENST00000441080 KRTAP2-4Q9BYR9 128 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 KRTAP2-1Q9BYU5 128 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 TPRKBQ9Y3C4 175 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 ZGRF1Q86YA3 2104 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 TRPM1Q7Z4N2 1603 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 NISCHQ9Y2I1 1504 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
PFDN4-202ENST00000441080 FRAS1Q86XX4 4008 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 A0A0J9YY99 117 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 POU6F1Q14863 301 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 LTC4SQ16873 150 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 LINC00269Q8N2A0 174 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 PLAC4Q8WY50 150 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 PLEKHB2Q96CS7 222 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 CCL19Q99731 98 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 FAM103A1Q9BTL3 118 aaKnown RBP0.37□□□□□ -2.35
PFDN4-202ENST00000441080 MACF1Q9UPN3 7388 aaKnown RBP0.37□□□□□ -2.35
PFDN4-202ENST00000441080 KCPQ6ZWJ8 1503 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 UBR2Q8IWV8 1755 aa0.37□□□□□ -2.35
PFDN4-202ENST00000441080 KMT2DO14686 5537 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 PDE6GP18545 87 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 TAS2R41P59536 307 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 RPL37AP61513 92 aaKnown RBP0.36□□□□□ -2.35
PFDN4-202ENST00000441080 ZCCHC23Q6ZST2 131 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 EFCAB11Q9BUY7 163 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 FRMPD1Q5SYB0 1578 aa0.36□□□□□ -2.35
PFDN4-202ENST00000441080 ASH1LQ9NR48 2969 aaKnown RBP0.36□□□□□ -2.35
PFDN4-202ENST00000441080 RTL9Q8NET4 1388 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 CACNA1EQ15878 2313 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 H3BQV1 296 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 GLRXP35754 106 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 TCTAP57738 103 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 MRPS36P82909 103 aaKnown RBP0.35□□□□□ -2.35
PFDN4-202ENST00000441080 OR4C12Q96R67 309 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 OTORQ9NRC9 128 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 LAMTOR3Q9UHA4 124 aa0.35□□□□□ -2.35
PFDN4-202ENST00000441080 C10orf111Q8N326 155 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 STX19Q8N4C7 294 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 TSKUQ8WUA8 353 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 BORCS8Q96FH0 119 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 CARD19Q96LW7 228 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 MED11Q9P086 117 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 UFC1Q9Y3C8 167 aa0.34□□□□□ -2.36
PFDN4-202ENST00000441080 EIF3AQ14152 1382 aaKnown RBP0.33□□□□□ -2.36
PFDN4-202ENST00000441080 NUP210LQ5VU65 1888 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 KPNA4O00629 521 aaPredicted RBP0.33□□□□□ -2.36
PFDN4-202ENST00000441080 FABP4P15090 132 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 NEDD8Q15843 81 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 LYG2Q86SG7 212 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 GRPEL2Q8TAA5 225 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 MCEEQ96PE7 176 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 NAT8BQ9UHF3 227 aa0.33□□□□□ -2.36
PFDN4-202ENST00000441080 N4BP2Q86UW6 1770 aaPredicted RBP0.32□□□□□ -2.36
PFDN4-202ENST00000441080 CASC2Q6XLA1 102 aa0.32□□□□□ -2.36
PFDN4-202ENST00000441080 FAM24BQ8N5W8 94 aa0.32□□□□□ -2.36
PFDN4-202ENST00000441080 C5orf17Q8NAS9 161 aa0.32□□□□□ -2.36
PFDN4-202ENST00000441080 OR4B1Q8NGF8 309 aa0.32□□□□□ -2.36
PFDN4-202ENST00000441080 IL20Q9NYY1 176 aa0.32□□□□□ -2.36
PFDN4-202ENST00000441080 SPTBP11277 2137 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 PRR15Q8IV56 129 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 CCL4L1Q8NHW4 92 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 DYDC1Q8WWB3 177 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 TAF9BQ9HBM6 251 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 NUBP2Q9Y5Y2 271 aa0.31□□□□□ -2.36
PFDN4-202ENST00000441080 KIAA1107Q9UPP5 1409 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms