RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-205ENST00000440514 M0R2Z0 102 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 PQLC2Q6ZP29 291 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 KCNRGQ8N5I3 272 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 Q8NAQ8 132 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 ZNF503Q96F45 646 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 C11orf68Q9H3H3 251 aaKnown RBP13.08□□□□□ -0.32
CPSF4-205ENST00000440514 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
CPSF4-205ENST00000440514 IGHV4-28A0A0C4DH34 117 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 M0R3E3 92 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 AMBPP02760 352 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 UBE2L3P68036 154 aaKnown RBP13.07□□□□□ -0.32
CPSF4-205ENST00000440514 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 AKAP14Q86UN6 197 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 OR10G4Q8NGN3 311 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
CPSF4-205ENST00000440514 PHYHIPLQ96FC7 376 aa13.07□□□□□ -0.32
CPSF4-205ENST00000440514 IGHV3OR16-12A0A075B7B8 117 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 BOLA2-SMG1P6H3BVE0 249 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 EXOC3-AS1Q8N2X6 119 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 RNF141Q8WVD5 230 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
CPSF4-205ENST00000440514 PFDN1O60925 122 aa13.05□□□□□ -0.32
CPSF4-205ENST00000440514 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
CPSF4-205ENST00000440514 MIFP14174 115 aa13.05□□□□□ -0.32
CPSF4-205ENST00000440514 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-205ENST00000440514 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
CPSF4-205ENST00000440514 ACTR3CQ9C0K3 210 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-205ENST00000440514 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
CPSF4-205ENST00000440514 HMGB3O15347 200 aaKnown RBP13.04□□□□□ -0.32
CPSF4-205ENST00000440514 RBMY1A1P0DJD3 496 aaKnown RBP13.04□□□□□ -0.32
CPSF4-205ENST00000440514 RBMY1CP0DJD4 496 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 ICAM4Q14773 271 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 RBMY1FQ15415 496 aaKnown RBP13.04□□□□□ -0.32
CPSF4-205ENST00000440514 FAM74A1Q5RGS3 127 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 EIF5AL1Q6IS14 154 aaKnown RBP13.04□□□□□ -0.32
CPSF4-205ENST00000440514 C1orf158Q8N1D5 194 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 OR10J6PQ8NGY7 276 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
CPSF4-205ENST00000440514 STARD9Q9P2P6 4700 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-205ENST00000440514 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
CPSF4-205ENST00000440514 AKR1C8PQ5T2L2 129 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 IGF2BP2-AS1Q96M15 143 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 CYTL1Q9NRR1 136 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
CPSF4-205ENST00000440514 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 NPIPB6E9PJ23 425 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 BCL2L11O43521 198 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 INSP01308 110 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 C1QBP02746 253 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 CSN1S1P47710 185 aa13.02□□□□□ -0.33
CPSF4-205ENST00000440514 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
CPSF4-205ENST00000440514 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
CPSF4-205ENST00000440514 UMAD1C9J7I0 102 aa13.01□□□□□ -0.33
CPSF4-205ENST00000440514 ERCC8Q13216 396 aa13.01□□□□□ -0.33
CPSF4-205ENST00000440514 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
CPSF4-205ENST00000440514 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
CPSF4-205ENST00000440514 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 CXorf1O96002 111 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 SEC11BP0C7V7 166 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 ARL14EPLP0DKL9 152 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 TPT1P13693 172 aaKnown RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 TSPOP30536 169 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 RANP62826 216 aaKnown RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 KIR3DS1Q14943 382 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 SSX7Q7RTT5 188 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 RAB24Q969Q5 203 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 NEU1Q99519 415 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 TMEM208Q9BTX3 173 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 ZNF471Q9BX82 626 aaPredicted RBP13□□□□□ -0.33
CPSF4-205ENST00000440514 Q9H3A6 140 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
CPSF4-205ENST00000440514 STAG3L2P0CL84 134 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 STAG3L3P0CL85 134 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 STOML3Q8TAV4 291 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 C11orf45Q8TAV5 145 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 CELA1Q9UNI1 258 aa12.99□□□□□ -0.33
CPSF4-205ENST00000440514 SMIM9A6NGZ8 99 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 J3KRW8 73 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 CDKN1BP46527 198 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 ODF3Q96PU9 254 aa12.98□□□□□ -0.33
CPSF4-205ENST00000440514 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms