RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LYSTQ99698 3801 aa9.84□□□□□ -0.83
LTBR-202ENST00000440421 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 DEFB131BA0A096LNP1 70 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 C17orf112F2Z3M2 114 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 HIST1H1EP10412 219 aaKnown RBP9.83□□□□□ -0.84
LTBR-202ENST00000440421 FCN2Q15485 313 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 FAM222AQ5U5X8 452 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 BLNKQ8WV28 456 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 SLC25A2Q9BXI2 301 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 MED28Q9H204 178 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 PLA2G2EQ9NZK7 142 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
LTBR-202ENST00000440421 IFNA5P01569 189 aa9.82□□□□□ -0.84
LTBR-202ENST00000440421 RPP25LQ8N5L8 163 aaKnown RBP9.82□□□□□ -0.84
LTBR-202ENST00000440421 SCGB1C1Q8TD33 95 aa9.82□□□□□ -0.84
LTBR-202ENST00000440421 LINC01587Q99440 93 aa9.82□□□□□ -0.84
LTBR-202ENST00000440421 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
LTBR-202ENST00000440421 DNAH1Q9P2D7 4330 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 IGHV4-4A0A075B6R2 117 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 M0R3E3 92 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 ZNF253O75346 499 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 NDUFB4O95168 129 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 OR10J4P0C629 311 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 HTN1P15515 57 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 CDKN1BP46527 198 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 FFAR4Q5NUL3 377 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 FAM167A-AS1Q96KT0 104 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
LTBR-202ENST00000440421 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
LTBR-202ENST00000440421 PLECQ15149 4684 aaKnown RBP9.81□□□□□ -0.84
LTBR-202ENST00000440421 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 J3KRW8 73 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 AZU1P20160 251 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 TCTAP57738 103 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 EXOC3-AS1Q8N2X6 119 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 FUT9Q9Y231 359 aa9.8□□□□□ -0.84
LTBR-202ENST00000440421 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 NPIPB6E9PJ23 425 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 OR7C2O60412 319 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 NBEAP1P0C6P0 100 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 HTN3P15516 51 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 TSPOP30536 169 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 ERCC8Q13216 396 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 PDE6HQ13956 83 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 ICAM4Q14773 271 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 TMEM256Q8N2U0 113 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 FXYD5Q96DB9 178 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 PAXXQ9BUH6 204 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 AAMDCQ9H7C9 122 aa9.79□□□□□ -0.84
LTBR-202ENST00000440421 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
LTBR-202ENST00000440421 TAS2R60P59551 318 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 DAD1P61803 113 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 Q5BKY6 102 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 GFI1BQ5VTD9 330 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 MRPL53Q96EL3 112 aaKnown RBP9.78□□□□□ -0.84
LTBR-202ENST00000440421 PRELID1Q9Y255 219 aa9.78□□□□□ -0.84
LTBR-202ENST00000440421 LEPP41159 167 aa9.77□□□□□ -0.85
LTBR-202ENST00000440421 RGS21Q2M5E4 152 aa9.77□□□□□ -0.85
LTBR-202ENST00000440421 RNF141Q8WVD5 230 aa9.77□□□□□ -0.85
LTBR-202ENST00000440421 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.85
LTBR-202ENST00000440421 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
LTBR-202ENST00000440421 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 H7BYZ3 331 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
LTBR-202ENST00000440421 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
LTBR-202ENST00000440421 DEFB130BP0DP73 79 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 DEFB130AP0DP74 79 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 UBE2L3P68036 154 aaKnown RBP9.76□□□□□ -0.85
LTBR-202ENST00000440421 OXA1LQ15070 435 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 NDUFAF3Q9BU61 184 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 AGPAT4-IT1Q9H0P7 198 aa9.76□□□□□ -0.85
LTBR-202ENST00000440421 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 TAS2R45P59539 299 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 RAB2AP61019 212 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 RANP62826 216 aaKnown RBP9.75□□□□□ -0.85
LTBR-202ENST00000440421 ACOT6Q3I5F7 207 aaPredicted RBP9.75□□□□□ -0.85
LTBR-202ENST00000440421 KHDC3LQ587J8 217 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 AQP10Q96PS8 301 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 C20orf144Q9BQM9 153 aa9.75□□□□□ -0.85
LTBR-202ENST00000440421 CCDC28AQ8IWP9 274 aa9.74□□□□□ -0.85
LTBR-202ENST00000440421 HSD17B11Q8NBQ5 300 aa9.74□□□□□ -0.85
LTBR-202ENST00000440421 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
LTBR-202ENST00000440421 VGLL1Q99990 258 aa9.74□□□□□ -0.85
LTBR-202ENST00000440421 Q9H3A6 140 aa9.74□□□□□ -0.85
LTBR-202ENST00000440421 FXYD6-FXYD2A0A087WZ82 144 aa9.73□□□□□ -0.85
LTBR-202ENST00000440421 A0A1W2PPV4 95 aa9.73□□□□□ -0.85
LTBR-202ENST00000440421 C7orf71A4D174 169 aa9.73□□□□□ -0.85
LTBR-202ENST00000440421 HMGB3O15347 200 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms