RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 RELQ04864 619 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 VGLL1Q99990 258 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 RAXQ9Y2V3 346 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 C20orf202A1L168 122 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 CRXO43186 299 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 SH2D1AO60880 128 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 NDUFA3O95167 84 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 FAM162BQ5T6X4 162 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 NPBQ8NG41 125 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
HERPUD1-204ENST00000439977 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 TMEM189A5PLL7 270 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 PRTN3P24158 256 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 CSN1S1P47710 185 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
HERPUD1-204ENST00000439977 A0A087X0K7 114 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 A0A1W2PPR1 153 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 CTSGP08311 255 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 EGR2P11161 476 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 TMEM11P17152 192 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 PPIFP30405 207 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 GPR183P32249 361 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 ERCC8Q13216 396 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 COX11Q9Y6N1 276 aa10.57□□□□□ -0.72
HERPUD1-204ENST00000439977 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 RNF182Q8N6D2 247 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 TWIST1Q15672 202 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 ZNF747Q9BV97 191 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
HERPUD1-204ENST00000439977 LINC01548A6NM66 108 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 ZNF207O43670 478 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 ORM1P02763 201 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 PRELID3AQ96N28 172 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 PRR25Q96S07 402 aa10.55□□□□□ -0.72
HERPUD1-204ENST00000439977 CBY3A6NI87 242 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 SELENOKQ9Y6D0 94 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 HIVEP3Q5T1R4 2406 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 A0A096LNJ9 63 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 G3V318 75 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 M0R1W7 72 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 IGHG4P01861 327 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 CLEC3BP05452 202 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 C15orf32Q32M92 178 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 TTC9CQ8N5M4 171 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 THYN1Q9P016 225 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 MSRB2Q9Y3D2 182 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 TRBV6-1A0A0K0K1D8 114 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 VAMP3Q15836 100 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
HERPUD1-204ENST00000439977 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 LINC00527Q9UJ94 153 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 IGHV3OR16-10A0A075B7F0 116 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 PDE6HQ13956 83 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 C11orf71Q6IPW1 123 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 SPG11Q96JI7 2443 aa10.53□□□□□ -0.72
HERPUD1-204ENST00000439977 NPYP01303 97 aa10.52□□□□□ -0.72
HERPUD1-204ENST00000439977 CKS2P33552 79 aa10.52□□□□□ -0.72
HERPUD1-204ENST00000439977 PSG9Q00887 426 aa10.52□□□□□ -0.72
HERPUD1-204ENST00000439977 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.72
HERPUD1-204ENST00000439977 Q8N9W7 124 aa10.52□□□□□ -0.72
HERPUD1-204ENST00000439977 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
HERPUD1-204ENST00000439977 CCDC144NLQ6NUI1 221 aa10.52□□□□□ -0.73
HERPUD1-204ENST00000439977 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
HERPUD1-204ENST00000439977 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.73
HERPUD1-204ENST00000439977 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
HERPUD1-204ENST00000439977 RHOGP84095 191 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 UBE2V1Q13404 147 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 UBTD1Q9HAC8 227 aa10.51□□□□□ -0.73
HERPUD1-204ENST00000439977 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms