RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 FOXE3Q13461 319 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 ITPR2Q14571 2701 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 CHEK1O14757 476 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 NDUFA6P56556 154 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 FABP9Q0Z7S8 132 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 LINC00322Q6ZN03 302 aaPredicted RBP11.5□□□□□ -0.57
LINC00163-202ENST00000439088 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
LINC00163-202ENST00000439088 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 UNC79Q9P2D8 2635 aa11.49□□□□□ -0.57
LINC00163-202ENST00000439088 A0A1W2PS18 150 aa11.49□□□□□ -0.57
LINC00163-202ENST00000439088 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
LINC00163-202ENST00000439088 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
LINC00163-202ENST00000439088 P01737 135 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 IGFL4Q6B9Z1 124 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 GPHB5Q86YW7 130 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
LINC00163-202ENST00000439088 ZNF469Q96JG9 3925 aaPredicted RBP11.48□□□□□ -0.57
LINC00163-202ENST00000439088 IZUMO1RA6ND01 250 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
LINC00163-202ENST00000439088 HOXA5P20719 270 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 TCL1AP56279 114 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 CT83Q5H943 113 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
LINC00163-202ENST00000439088 K7EMT4 169 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 GBGT1Q8N5D6 347 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
LINC00163-202ENST00000439088 ZNF705FA8MVS1 300 aaPredicted RBP11.47□□□□□ -0.57
LINC00163-202ENST00000439088 A8MWL6 223 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
LINC00163-202ENST00000439088 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
LINC00163-202ENST00000439088 COX19Q49B96 90 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 SAPCD1Q5SSQ6 148 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
LINC00163-202ENST00000439088 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 GNB1LQ9BYB4 327 aa11.47□□□□□ -0.57
LINC00163-202ENST00000439088 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 S100A12P80511 92 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 COX8CQ7Z4L0 72 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
LINC00163-202ENST00000439088 DAZ1Q9NQZ3 744 aaKnown RBP11.46□□□□□ -0.57
LINC00163-202ENST00000439088 HECTD1Q9ULT8 2610 aa11.46□□□□□ -0.58
LINC00163-202ENST00000439088 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
LINC00163-202ENST00000439088 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 SPINK4O60575 86 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 LGALS1P09382 135 aaKnown RBP11.45□□□□□ -0.58
LINC00163-202ENST00000439088 CBLN1P23435 193 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 PRR25Q96S07 402 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 NEU1Q99519 415 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 VGLL1Q99990 258 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
LINC00163-202ENST00000439088 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
LINC00163-202ENST00000439088 CRIP1P50238 77 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 ASCL2Q99929 193 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 RHPN1-AS1Q9BWJ2 59 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 SMPXQ9UHP9 88 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 MT-ND6P03923 174 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
LINC00163-202ENST00000439088 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
LINC00163-202ENST00000439088 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
LINC00163-202ENST00000439088 WIPF2Q8TF74 440 aaPredicted RBP11.43□□□□□ -0.58
LINC00163-202ENST00000439088 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
LINC00163-202ENST00000439088 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
LINC00163-202ENST00000439088 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
LINC00163-202ENST00000439088 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 OR2D3Q8NGH3 330 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 KLHDC1Q8N7A1 406 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
LINC00163-202ENST00000439088 XKRY2A2RUG3 117 aa11.41□□□□□ -0.58
LINC00163-202ENST00000439088 SCGB2A2Q13296 93 aa11.41□□□□□ -0.58
LINC00163-202ENST00000439088 TCF24Q7RTU0 167 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms