RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FMC1Q96HJ9 113 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 ASCL2Q99929 193 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
PTCHD3-201ENST00000438700 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 LOC102724200A0A096LPH7 203 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 CBY3A6NI87 242 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 LTAP01374 205 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 KRTAP10-9P60411 292 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 Q8N6K4 173 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 RNF125Q96EQ8 232 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 MLST8Q9BVC4 326 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 TIMM8BQ9Y5J9 83 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 ABCA12Q86UK0 2595 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 TAX1BP3O14907 124 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 GNG7O60262 68 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 TMEM11P17152 192 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 DSCR9P59020 149 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 KLF5Q13887 457 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 EBI3Q14213 229 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 ZNF491Q8N8L2 437 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
PTCHD3-201ENST00000438700 MUC21A0A0G2JKD1 596 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 MUC21A0A140T8X8 626 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 MUC21Q5SSG8 566 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 CIARTQ8N365 385 aaPredicted RBP10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 FANCD2OSQ96PS1 177 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 OTORQ9NRC9 128 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 S100A7P31151 101 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 FCGR2BP31994 310 aaPredicted RBP10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 COTL1Q14019 142 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 ZNF562Q6V9R5 426 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 PRNTQ86SH4 94 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 SHANK2-AS3Q9BTD1 123 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 TMEM14CQ9P0S9 112 aa10.86□□□□□ -0.67
PTCHD3-201ENST00000438700 TENM4Q6N022 2769 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 IGHV1-24A0A0C4DH33 117 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 P01737 135 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 MSMBP08118 114 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 Q86TA4 180 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 BPIFA4PQ86YQ2 179 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 TRAV40A0A0B4J280 105 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 H3BRN7 92 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 SNAI2O43623 268 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
PTCHD3-201ENST00000438700 DOPEY2Q9Y3R5 2298 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 OR2J3O76001 311 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 PGLYRP4Q96LB8 373 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 CHRDL1Q9BU40 450 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 A0A087X0K7 114 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 IGHV1-69DA0A0B4J2H0 117 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 IGLV2-11P01706 119 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 IGHV1-69P01742 117 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 HLA-DRB1P01911 266 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 SLC25A16P16260 332 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCHD3-201ENST00000438700 TRAV30A0A087WSZ9 112 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 NPIPB5A8MRT5 1133 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 F8W735 103 aaPredicted RBP10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 IGHV3OR16-8A0A075B7F1 116 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 C19orf71A6NCJ1 209 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 M0R3E3 92 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 MFAP4P55083 255 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 RASL11AQ6T310 242 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 PRSS22Q9GZN4 317 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
PTCHD3-201ENST00000438700 NAV2Q8IVL1 2488 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 IGHV3-35A0A0C4DH35 117 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 B4DSR2 109 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 LEPROTL1O95214 131 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 Q8N9W7 124 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 HIF1ANQ9NWT6 349 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 A8MWL6 223 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 CSN3P07498 182 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 TTC9CQ8N5M4 171 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
PTCHD3-201ENST00000438700 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
PTCHD3-201ENST00000438700 C1RLQ9NZP8 487 aa10.81□□□□□ -0.68
PTCHD3-201ENST00000438700 A0A096LNT2 108 aa10.81□□□□□ -0.68
PTCHD3-201ENST00000438700 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
PTCHD3-201ENST00000438700 CRXO43186 299 aaPredicted RBP10.81□□□□□ -0.68
PTCHD3-201ENST00000438700 EGR2P11161 476 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms