RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 C7orf65Q6ZTY9 151 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR52L1Q8NGH7 329 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 DNAJC9Q8WXX5 260 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 C20orf27Q9GZN8 174 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 MUC22E2RYF6 1773 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ANK2Q01484 3957 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ATG2AQ2TAZ0 1938 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ECM29Q5VYK3 1845 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 PATJQ8NI35 1801 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 UBR2Q8IWV8 1755 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 BUB1B-PAK6H3BSN5 160 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF682O95780 498 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 CRPP02741 224 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 CST2P09228 141 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 GPX2P18283 190 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 MAGEA12P43365 314 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF80P51504 273 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 TAF1AQ15573 450 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 NDUFA5Q16718 116 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 FAM173BQ6P4H8 233 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 CLVS1Q8IUQ0 354 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 C11orf40Q8WZ69 217 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 TMEM106AQ96A25 262 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 SCGB3A1Q96QR1 104 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 PHB2Q99623 299 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 HSPB9Q9BQS6 159 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 ENY2Q9NPA8 101 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 BAIAP2Q9UQB8 552 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 CYSLTR1Q9Y271 337 aa1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 FAM32AQ9Y421 112 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-204ENST00000438419 TACC2O95359 2948 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF106Q9H2Y7 1883 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 TENM3Q9P273 2699 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 KIAA1109Q2LD37 5005 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 FAM159BA6NKW6 160 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 C8GP07360 202 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 UBBP0CG47 229 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 SMIM17P0DL12 118 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 DEFA3P59666 94 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 ARHGAP11BQ3KRB8 267 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 TEX36Q5VZQ5 186 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 MIR17HGQ75NE6 70 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 C12orf45Q8N5I9 185 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR8B3Q8NGG8 313 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR10X1Q8NGY0 326 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 TERB2Q8NHR7 220 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF563Q8TA94 476 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 CEP19Q96LK0 163 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 GINS4Q9BRT9 223 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 C9orf16Q9BUW7 83 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 CCDC94Q9BW85 323 aaPredicted RBP1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 MRPL32Q9BYC8 188 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 SLC39A9Q9NUM3 307 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 ERGIC3Q9Y282 383 aa1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-204ENST00000438419 VPS13CQ709C8 3753 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 MEIKINA0A087WXM9 373 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 SDCBPO00560 298 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR2J2O76002 312 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 PPIBP23284 216 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 G6PCP35575 357 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 AKR1C3P42330 323 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 CDC42P60953 191 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 ARF6P62330 175 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 HACD4Q5VWC8 232 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 DHFR2Q86XF0 187 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 WFDC11Q8NEX6 87 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 PFN4Q8NHR9 129 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 SLC25A40Q8TBP6 338 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 Q96M85 177 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 OPTCQ9UBM4 332 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 ARL5AQ9Y689 179 aa1.3□□□□□ -2.2
TRAPPC13-204ENST00000438419 IBTKQ9P2D0 1353 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 MAP1AP78559 2803 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZANQ9Y493 2812 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 RYR2Q92736 4967 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 TENM2Q9NT68 2774 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 IBA57-AS1B1ANH7 110 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 PMP2P02689 132 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 CLPSP04118 112 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 METTL15P1P0C7V9 234 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF705BP0CI00 300 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 S100A4P26447 101 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 CASP1P29466 404 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 ZNF345Q14585 488 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 ELOBQ15370 118 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 LCN15Q6UWW0 184 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 AAED1Q7RTV5 226 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 HIST3H2BBQ8N257 126 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 C9orf163Q8N9P6 203 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 PXT1Q8NFP0 134 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 OR52R1Q8NGF1 315 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 GNPDA2Q8TDQ7 276 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 MBD3L1Q8WWY6 194 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 NAA38Q9BRA0 125 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 ARMC1Q9NVT9 282 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 CKLFQ9UBR5 152 aa1.29□□□□□ -2.2
TRAPPC13-204ENST00000438419 DOCK2Q92608 1830 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms