RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MINOS1-NBL1R4GNA1 71 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 BDP1A6H8Y1 2624 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 SMAD7O15105 426 aaKnown RBP5.33□□□□□ -1.56
CSDE1-205ENST00000438362 LY6HO94772 140 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 PRTN3P24158 256 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 GTSCR1Q86UQ5 136 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 ZC2HC1AQ96GY0 325 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 TRAV21A0A0B4J279 112 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 A0A1B0GWB2 263 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 H3BRN7 92 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 WISP2O76076 250 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 CGB3P0DN86 165 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 CGB7P0DN87 165 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 CTSZQ9UBR2 303 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 ATG2AQ2TAZ0 1938 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 CEP192Q8TEP8 1941 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 PRSS46E5RG02 174 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 H7C2G1 150 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 COX8AP10176 69 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 LAGE3Q14657 143 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF56Q15929 161 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
CSDE1-205ENST00000438362 PLXNB1O43157 2135 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 IGHV3-11P01762 117 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 TMEM158Q8WZ71 300 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 HCFC1P51610 2035 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 C22orf46C9J442 243 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 K7EM74 188 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 PRSS2P07478 247 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 RNASE4P34096 147 aaKnown RBP5.32□□□□□ -1.56
CSDE1-205ENST00000438362 PAX8Q06710 450 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 PIMREGQ9BSJ6 248 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 INS-IGF2F8WCM5 200 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 NDUFB8O95169 186 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 APOMO95445 188 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 GP9P14770 177 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 PAX1P15863 534 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 RIPPLY3P57055 190 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 BVES-AS1Q5T3Y7 98 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 Q6ZVH6 145 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 SEM1Q6ZVN7 128 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF491Q8N8L2 437 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 PRR25Q96S07 402 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 CST9LQ9H4G1 147 aa5.32□□□□□ -1.56
CSDE1-205ENST00000438362 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 SNRPD3P62318 126 aaKnown RBP5.31□□□□□ -1.56
CSDE1-205ENST00000438362 LGALS9BQ3B8N2 356 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 MRPL51Q4U2R6 128 aaKnown RBP5.31□□□□□ -1.56
CSDE1-205ENST00000438362 PAPPA-AS1Q5QFB9 102 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 SIGLEC15Q6ZMC9 328 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 PIP4P1Q86T03 277 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 SIGLEC8Q9NYZ4 499 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 DOPEY2Q9Y3R5 2298 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 NCKAP5O14513 1909 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 E7EUB6 86 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 NPIPB6E9PJ23 425 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 OCIAD2Q56VL3 154 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 UTF1Q5T230 341 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 C17orf77Q96MU5 243 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 LINC00527Q9UJ94 153 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 CHTOPQ9Y3Y2 248 aaKnown RBP5.31□□□□□ -1.56
CSDE1-205ENST00000438362 OVOL1O14753 267 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 CEACAM4O75871 244 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 ATP5J2P56134 94 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 ERCC8Q13216 396 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF747Q9BV97 191 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 MRPL36Q9P0J6 103 aaKnown RBP5.31□□□□□ -1.56
CSDE1-205ENST00000438362 CYSLTR1Q9Y271 337 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
CSDE1-205ENST00000438362 COX6CP09669 75 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 C9orf139Q6ZV77 190 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 SPG11Q96JI7 2443 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 TRAV41A0A0B4J266 112 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 H3BRM9 83 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 IGLV2-8P01709 118 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 LINC00173Q6ZV60 143 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 OTOGLQ3ZCN5 2332 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF815PA8K554 130 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 PRR30Q53SZ7 412 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-205ENST00000438362 FAM120AOSQ5T036 256 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 PRSS57Q6UWY2 283 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 C1orf229Q6ZS94 237 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF418Q8TF45 676 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-205ENST00000438362 GTSF1Q8WW33 167 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 COL5A1P20908 1838 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-205ENST00000438362 TRBV7-1A0A0A6YYK4 115 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 CCL25O15444 150 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 PLNP26678 52 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 NDPQ00604 133 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 SAMD13Q5VXD3 122 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 ARL6IP6Q8N6S5 226 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms