RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
SGCE-205ENST00000437425 GFRA4Q9GZZ7 299 aa11.78□□□□□ -0.52
SGCE-205ENST00000437425 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 C19orf71A6NCJ1 209 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 M0R3E3 92 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 MT-ND6P03923 174 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 CT45A10P0DMU9 189 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 LCN12Q6JVE5 192 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 PRR27Q6MZM9 219 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 UNQ9165/PRO28630Q6UXU0 137 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 NDFIP1Q9BT67 221 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.52
SGCE-205ENST00000437425 RPP21Q9H633 154 aaKnown RBP11.77□□□□□ -0.52
SGCE-205ENST00000437425 NAT8BQ9UHF3 227 aa11.77□□□□□ -0.52
SGCE-205ENST00000437425 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 NPIPB6E9PJ23 425 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
SGCE-205ENST00000437425 APOHP02749 345 aaPredicted RBP11.76□□□□□ -0.53
SGCE-205ENST00000437425 ACTL10Q5JWF8 245 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 REC114Q7Z4M0 266 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 TRAV8-1A0A0A6YYK1 113 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 DNAJC9-AS1A6NH13 148 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 LGALS9O00182 355 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 RPLP1P05386 114 aaKnown RBP11.76□□□□□ -0.53
SGCE-205ENST00000437425 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
SGCE-205ENST00000437425 PDZD2O15018 2839 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 IGHV3-66A0A0C4DH42 116 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 UBE2CO00762 179 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 PHOX2AO14813 284 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
SGCE-205ENST00000437425 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 ATP5L2Q7Z4Y8 100 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
SGCE-205ENST00000437425 A8MWP6 167 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
SGCE-205ENST00000437425 SNRPEP62304 92 aaKnown RBP11.74□□□□□ -0.53
SGCE-205ENST00000437425 KLHDC1Q8N7A1 406 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
SGCE-205ENST00000437425 FRZBQ92765 325 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
SGCE-205ENST00000437425 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
SGCE-205ENST00000437425 Q6AWC8 147 aa11.73□□□□□ -0.53
SGCE-205ENST00000437425 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
SGCE-205ENST00000437425 PRR25Q96S07 402 aa11.73□□□□□ -0.53
SGCE-205ENST00000437425 JMJD8Q96S16 334 aa11.73□□□□□ -0.53
SGCE-205ENST00000437425 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
SGCE-205ENST00000437425 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 RNASE1P07998 156 aaKnown RBP11.72□□□□□ -0.53
SGCE-205ENST00000437425 ZC2HC1AQ96GY0 325 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 LENEPQ9Y5L5 61 aa11.72□□□□□ -0.53
SGCE-205ENST00000437425 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.53
SGCE-205ENST00000437425 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 OVOL1O14753 267 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.53
SGCE-205ENST00000437425 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 SRSF2Q01130 221 aaKnown RBP11.71□□□□□ -0.53
SGCE-205ENST00000437425 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 SMUG1Q53HV7 270 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 DUX5Q96PT3 197 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 NEU1Q99519 415 aa11.71□□□□□ -0.53
SGCE-205ENST00000437425 HIGD1CA8MV81 97 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 SRD5A1P18405 259 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 HOXA5P20719 270 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 ID1P41134 155 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
SGCE-205ENST00000437425 NDUFA6P56556 154 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
SGCE-205ENST00000437425 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 C10orf99Q6UWK7 81 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 RBPMS2Q6ZRY4 209 aaKnown RBP11.7□□□□□ -0.54
SGCE-205ENST00000437425 C9orf47Q6ZRZ4 202 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 Q6ZSV7 163 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms